RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 C14orf178Q8N769 122 aaPredicted RBP4.74□□□□□ -1.65
LINC00534-203ENST00000523406 OR2K2Q8NGT1 345 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 MRAP2Q96G30 205 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 RNF185Q96GF1 192 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 LINC01587Q99440 93 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 DPH3P1Q9H4G8 78 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
LINC00534-203ENST00000523406 SCRT2Q9NQ03 307 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 GSN-AS1Q9NRJ2 163 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 HSPB8Q9UJY1 196 aa4.74□□□□□ -1.65
LINC00534-203ENST00000523406 FN1P02751 2386 aaKnown RBP4.73□□□□□ -1.65
LINC00534-203ENST00000523406 ZNF469Q96JG9 3925 aaPredicted RBP4.73□□□□□ -1.65
LINC00534-203ENST00000523406 IGHV3-16A0A0C4DH30 117 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 IGHV1-24A0A0C4DH33 117 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 C20orf202A1L168 122 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 TSTD3H0UI37 97 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 PPP1R17O96001 155 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 C3orf79P0CE67 100 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 RNASE3P12724 160 aaKnown RBP4.73□□□□□ -1.65
LINC00534-203ENST00000523406 PKIAP61925 76 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 NUTF2P61970 127 aaKnown RBP4.73□□□□□ -1.65
LINC00534-203ENST00000523406 TMEM208Q9BTX3 173 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 TMEM70Q9BUB7 260 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 MAP1LC3CQ9BXW4 147 aa4.73□□□□□ -1.65
LINC00534-203ENST00000523406 ZNF256Q9Y2P7 627 aaPredicted RBP4.73□□□□□ -1.65
LINC00534-203ENST00000523406 TRAV26-2A0A0B4J265 109 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 RBMY1BA6NDE4 496 aaKnown RBP4.72□□□□□ -1.65
LINC00534-203ENST00000523406 RBMY1EA6NEQ0 496 aaKnown RBP4.72□□□□□ -1.65
LINC00534-203ENST00000523406 A8MTW9 85 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 NXPH4O95158 308 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 IGLV1-51P01701 117 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 RBMY1DP0C7P1 496 aaKnown RBP4.72□□□□□ -1.65
LINC00534-203ENST00000523406 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
LINC00534-203ENST00000523406 KRTAP10-3P60369 221 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 Q8N8P6 123 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 VAMP8Q9BV40 100 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 PRO1933Q9H354 126 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 MDFICQ9P1T7 246 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 AGRNO00468 2067 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 F8P00451 2351 aa4.72□□□□□ -1.65
LINC00534-203ENST00000523406 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
LINC00534-203ENST00000523406 H0Y8G0 127 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 CRXO43186 299 aaPredicted RBP4.71□□□□□ -1.66
LINC00534-203ENST00000523406 HBDP02042 147 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 ZNF415Q09FC8 603 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 ZNF876PQ49A33 203 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
LINC00534-203ENST00000523406 C9orf85Q96MD7 179 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 C20orf144Q9BQM9 153 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 XCL2Q9UBD3 114 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
LINC00534-203ENST00000523406 IGHV3OR16-12A0A075B7B8 117 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 GAS8-AS1O95177 125 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 FCER1GP30273 86 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 LAGE3Q14657 143 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 ZNF56Q15929 161 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 FAM74A4Q5TZK3 123 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 PET117Q6UWS5 81 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 TEX43Q6ZNM6 134 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 LINC00173Q6ZV60 143 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 TRPT1Q86TN4 253 aaKnown RBP4.7□□□□□ -1.66
LINC00534-203ENST00000523406 ZNF664Q8N3J9 261 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 ST20Q9HBF5 79 aa4.7□□□□□ -1.66
LINC00534-203ENST00000523406 ATRQ13535 2644 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 HSBP1L1C9JCN9 74 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 M0R2P5 195 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 TSHBP01222 138 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RBMY1A1P0DJD3 496 aaKnown RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RBMY1CP0DJD4 496 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RPL35AP18077 110 aaKnown RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 DDTP30046 118 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 INSL3P51460 131 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RBMY1FQ15415 496 aaKnown RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 C9orf66Q5T8R8 295 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 ZNF705AQ6ZN79 300 aaPredicted RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 GTSCR1Q86UQ5 136 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RASL10AQ92737 203 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
LINC00534-203ENST00000523406 LINC00467Q9BRT7 94 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 SPXQ9BT56 116 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 SMIM2Q9BVW6 85 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 JPT2Q9H910 190 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 GOLT1BQ9Y3E0 138 aa4.69□□□□□ -1.66
LINC00534-203ENST00000523406 NIPBLQ6KC79 2804 aaeCLIP4.69□□□□□ -1.664e-7■■□□□ 14
LINC00534-203ENST00000523406 TRAV9-2A0A087WT02 112 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 LINC01546A6NGU7 62 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 A8MWV9 139 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 LINC00587B1AMM8 73 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 H7C1H1 209 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 TCAPO15273 167 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 PRSS1P07477 247 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 G0S2P27469 103 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 DEFA6Q01524 100 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 SPATA45Q537H7 98 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 ORMDL2Q53FV1 153 aa4.68□□□□□ -1.66
LINC00534-203ENST00000523406 MORN3Q6PF18 240 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms