RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ZNF720Q7Z2F6 126 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 LINC00304Q8N9R0 145 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 S100A16Q96FQ6 103 aaKnown RBP2.08□□□□□ -2.08
SKP1-209ENST00000522552 MGST2Q99735 147 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
SKP1-209ENST00000522552 DOCK2Q92608 1830 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 EXPH5Q8NEV8 1989 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 ERVK-7P63135 1459 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 SHANK2Q9UPX8 1470 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 TRBV7-1A0A0A6YYK4 115 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 TEX49A0A1B0GTD5 131 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 IGLV3-1P01715 115 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 TRAPPC2P0DI81 140 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 TRAPPC2BP0DI82 140 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 UBE2D1P51668 147 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 KRTAP10-5P60370 271 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 MPV17LQ2QL34 196 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 ALKAL2Q6UX46 152 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 DNMBPQ6XZF7 1577 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 ZNF818PQ6ZRF7 136 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 S100A13Q99584 98 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 PSME4Q14997 1843 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 KDM6BO15054 1643 aa2.07□□□□□ -2.08
SKP1-209ENST00000522552 CEP162Q5TB80 1403 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 PRRC2BQ5JSZ5 2229 aaKnown RBP2.06□□□□□ -2.08
SKP1-209ENST00000522552 PDE6GP18545 87 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 C10orf128Q5T292 105 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 TXNDC17Q9BRA2 123 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 REG4Q9BYZ8 158 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 CACFD1Q9UGQ2 172 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 KLK9Q9UKQ9 250 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 CTTNBP2Q8WZ74 1663 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 RGPD3A6NKT7 1758 aaPredicted RBP2.06□□□□□ -2.08
SKP1-209ENST00000522552 PI4KAP42356 2102 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 ARHGEF12Q9NZN5 1544 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 TRAV23DV6A0A075B6W5 121 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 IGLC7A0M8Q6 106 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 JMJD7-PLA2G4BH0Y9G9 81 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 TRGV9Q99603 122 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 MANBALQ9NQG1 85 aa2.06□□□□□ -2.08
SKP1-209ENST00000522552 ZNF142P52746 1687 aaPredicted RBP2.05□□□□□ -2.08
SKP1-209ENST00000522552 APOC3P02656 99 aa2.05□□□□□ -2.08
SKP1-209ENST00000522552 WFDC10AQ9H1F0 79 aa2.05□□□□□ -2.08
SKP1-209ENST00000522552 UQCR10Q9UDW1 63 aa2.05□□□□□ -2.08
SKP1-209ENST00000522552 ERICH3Q5RHP9 1530 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 NOTCH3Q9UM47 2321 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 TRBV7-3A0A075B6L6 115 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 CLPSL1A2RUU4 121 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 SYS1-DBNDD2H3BUS1 97 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 NDUFC1O43677 76 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 COA5Q86WW8 74 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 PLIN4Q96Q06 1357 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 INTS1Q8N201 2190 aaKnown RBP2.04□□□□□ -2.08
SKP1-209ENST00000522552 DLG5Q8TDM6 1919 aa2.04□□□□□ -2.08
SKP1-209ENST00000522552 HIGD1CA8MV81 97 aa2.03□□□□□ -2.08
SKP1-209ENST00000522552 Q6ZRN7 208 aaPredicted RBP2.03□□□□□ -2.08
SKP1-209ENST00000522552 CYP2G1PQ6ZSU1 146 aa2.03□□□□□ -2.08
SKP1-209ENST00000522552 AMELYQ99218 206 aa2.03□□□□□ -2.08
SKP1-209ENST00000522552 TET1Q8NFU7 2136 aa2.03□□□□□ -2.08
SKP1-209ENST00000522552 CACNA1GO43497 2377 aa2.03□□□□□ -2.08
SKP1-209ENST00000522552 PXDNQ92626 1479 aa2.03□□□□□ -2.09
SKP1-209ENST00000522552 LRRIQ1Q96JM4 1722 aa2.03□□□□□ -2.09
SKP1-209ENST00000522552 TRAV22A0A0B4J277 110 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 TRBV6-5A0A0K0K1A5 114 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 DNAL4O96015 105 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 IGLV3-19P01714 112 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 KRTAP10-8P60410 259 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 Q5VV11 94 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 FAM167A-AS1Q96KT0 104 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 NXT2Q9NPJ8 142 aaKnown RBP2.02□□□□□ -2.09
SKP1-209ENST00000522552 RABAC1Q9UI14 185 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 EPRSP07814 1512 aaKnown RBP2.02□□□□□ -2.09
SKP1-209ENST00000522552 DLEC1Q9Y238 1755 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 NRXN2Q9P2S2 1712 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 PLXNA1Q9UIW2 1896 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 H7BZZ5 65 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 UBE2D3P61077 147 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 UBE2D2P62837 147 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 BPESC1Q9GZL8 116 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 KIF20BQ96Q89 1820 aa2.02□□□□□ -2.09
SKP1-209ENST00000522552 MLH3Q9UHC1 1453 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 ARFGEF1Q9Y6D6 1849 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 LOC101927531A0A1B0GV80 90 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 CHKB-CPT1BH3BT56 60 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 Q8N6K4 173 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 PRO1854Q9UHT4 67 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 SPCS1Q9Y6A9 102 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 MYH4Q9Y623 1939 aa2.01□□□□□ -2.09
SKP1-209ENST00000522552 COL4A6Q14031 1691 aa2□□□□□ -2.09
SKP1-209ENST00000522552 SUPT6HQ7KZ85 1726 aaKnown RBP2□□□□□ -2.09
SKP1-209ENST00000522552 A0A0G2JND7 137 aa2□□□□□ -2.09
SKP1-209ENST00000522552 SMIM31A0A1B0GVY4 71 aa2□□□□□ -2.09
SKP1-209ENST00000522552 ADIRFQ15847 76 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms