RNA–Protein interactions for RNA: ENST00000521172.1

PTK2-229, Transcript of protein tyrosine kinase 2, human

TSL 5

Gene PTK2, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-229	ENST00000521172	GUCA1A	P43080	201 aa	Predicted RBP	0.33	□□□□□ -2.36
PTK2-229	ENST00000521172	DPH3	Q96FX2	82 aa		0.33	□□□□□ -2.36
PTK2-229	ENST00000521172	TMEM191A	Q9H0A3	160 aa		0.33	□□□□□ -2.36
PTK2-229	ENST00000521172	DAPK1	P53355	1430 aa		0.32	□□□□□ -2.36
PTK2-229	ENST00000521172	NDUFA2	O43678	99 aa		0.32	□□□□□ -2.36
PTK2-229	ENST00000521172	S100A7L2	Q5SY68	101 aa		0.32	□□□□□ -2.36
PTK2-229	ENST00000521172	SPTSSA	Q969W0	71 aa		0.32	□□□□□ -2.36
PTK2-229	ENST00000521172	NWD2	Q9ULI1	1742 aa		0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	TRGV1	A0A0A0MS02	117 aa		0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	PIP	P12273	146 aa	Predicted RBP	0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	EDDM3B	P56851	147 aa		0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	RPL7L1	Q6DKI1	246 aa	Known RBP	0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	KCNRG	Q8N5I3	272 aa		0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	UNC13B	O14795	1591 aa		0.31	□□□□□ -2.36
PTK2-229	ENST00000521172	CHD9	Q3L8U1	2897 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	NDUFB6	O95139	128 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	ACYP2	P14621	99 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	SPTSSB	Q8NFR3	76 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	TCEAL4	Q96EI5	215 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	CACNA1C	Q13936	2221 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	ASXL3	Q9C0F0	2248 aa		0.3	□□□□□ -2.36
PTK2-229	ENST00000521172	GOLGA3	Q08378	1498 aa		0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	DOCK1	Q14185	1865 aa		0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	NMB	P08949	121 aa		0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	CBLN1	P23435	193 aa		0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	S100A12	P80511	92 aa		0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	PAIP2B	Q9ULR5	123 aa	Known RBP	0.29	□□□□□ -2.36
PTK2-229	ENST00000521172	IFT172	Q9UG01	1749 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172	AHCTF1	Q8WYP5	2266 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172		A6NIN4	97 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172	SNCG	O76070	127 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172	ARPC4	P59998	168 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172		Q6ZRX8	168 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172	PATJ	Q8NI35	1801 aa		0.28	□□□□□ -2.36
PTK2-229	ENST00000521172	KMT2D	O14686	5537 aa		0.28	□□□□□ -2.37
PTK2-229	ENST00000521172	IGSF10	Q6WRI0	2623 aa		0.27	□□□□□ -2.37
PTK2-229	ENST00000521172	IFNA17	P01571	189 aa		0.27	□□□□□ -2.37
PTK2-229	ENST00000521172	APOD	P05090	189 aa		0.27	□□□□□ -2.37
PTK2-229	ENST00000521172	ZNF518A	Q6AHZ1	1483 aa		0.27	□□□□□ -2.37
PTK2-229	ENST00000521172	CELSR1	Q9NYQ6	3014 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	TMEM14DP	A8MWL7	114 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	HIST1H1D	P16402	221 aa	Known RBP	0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	WFDC6	Q9BQY6	131 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	FAM107B	Q9H098	131 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	CCDC167	Q9P0B6	97 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	ZMYM4	Q5VZL5	1548 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	PRDM2	Q13029	1718 aa		0.26	□□□□□ -2.37
PTK2-229	ENST00000521172	CASKIN1	Q8WXD9	1431 aa		0.25	□□□□□ -2.37
PTK2-229	ENST00000521172	CCDC58	Q4VC31	144 aa		0.25	□□□□□ -2.37
PTK2-229	ENST00000521172	ZNF818P	Q6ZRF7	136 aa		0.25	□□□□□ -2.37
PTK2-229	ENST00000521172	SEC11C	Q9BY50	192 aa		0.25	□□□□□ -2.37
PTK2-229	ENST00000521172	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	LRRC37A3	O60309	1634 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	NCOR2	Q9Y618	2525 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	TRBV10-3	A0A0K0K1G6	114 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172		G3V318	75 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	APOC4-APOC2	K7ER74	178 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	GNG7	O60262	68 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	INSL4	Q14641	139 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	LSM10	Q969L4	123 aa	Known RBP	0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	PDCD10	Q9BUL8	212 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	LINC00470	Q9BZP3	86 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	LINC00312	Q9Y6C7	94 aa		0.24	□□□□□ -2.37
PTK2-229	ENST00000521172	IFT140	Q96RY7	1462 aa		0.23	□□□□□ -2.37
PTK2-229	ENST00000521172	FAM92A	A1XBS5	289 aa		0.23	□□□□□ -2.37
PTK2-229	ENST00000521172	CCL8	P80075	99 aa		0.23	□□□□□ -2.37
PTK2-229	ENST00000521172	MACF1	Q9UPN3	7388 aa	Known RBP	0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	UNC79	Q9P2D8	2635 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	ARAP2	Q8WZ64	1704 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	TRAV1-2	A0A0B4J238	106 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	HMGN1	P05114	100 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	ARL11	Q969Q4	196 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	AGPAT4-IT1	Q9H0P7	198 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	DOCK2	Q92608	1830 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	CFTR	P13569	1480 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	PI4KA	P42356	2102 aa		0.22	□□□□□ -2.37
PTK2-229	ENST00000521172	GCHFR	P30047	84 aa		0.21	□□□□□ -2.38
PTK2-229	ENST00000521172	SELENOW	P63302	87 aa		0.21	□□□□□ -2.38
PTK2-229	ENST00000521172	COX6A2	Q02221	97 aa		0.21	□□□□□ -2.38
PTK2-229	ENST00000521172	UBR5	O95071	2799 aa	Predicted RBP	0.2	□□□□□ -2.38
PTK2-229	ENST00000521172	MBD5	Q9P267	1494 aa		0.2	□□□□□ -2.38
PTK2-229	ENST00000521172	FSIP2	Q5CZC0	6907 aa		0.2	□□□□□ -2.38
PTK2-229	ENST00000521172	FAM208B	Q5VWN6	2430 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	ZNF292	O60281	2723 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	HCG22	E2RYF7	251 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172		K7EP13	123 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	RBM3	P98179	157 aa	Known RBP	0.19	□□□□□ -2.38
PTK2-229	ENST00000521172		Q8N8P6	123 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	SCP2D1	Q9UJQ7	156 aa		0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	SYNE2	Q8WXH0	6885 aa	Known RBP	0.19	□□□□□ -2.38
PTK2-229	ENST00000521172	PLXNB2	O15031	1838 aa		0.18	□□□□□ -2.38
PTK2-229	ENST00000521172	PXDN	Q92626	1479 aa		0.18	□□□□□ -2.38
PTK2-229	ENST00000521172	SIX6	O95475	246 aa		0.18	□□□□□ -2.38
PTK2-229	ENST00000521172	SNRNP25	Q9BV90	132 aa	Known RBP	0.18	□□□□□ -2.38
PTK2-229	ENST00000521172		Q5BKY6	102 aa		0.17	□□□□□ -2.38
PTK2-229	ENST00000521172	MEIG1	Q5JSS6	88 aa		0.17	□□□□□ -2.38
PTK2-229	ENST00000521172		Q5VV11	94 aa		0.17	□□□□□ -2.38
PTK2-229	ENST00000521172		Q6AWC8	147 aa		0.17	□□□□□ -2.38
PTK2-229	ENST00000521172	TSC22D3	Q99576	134 aa		0.17	□□□□□ -2.38
PTK2-229	ENST00000521172	RERGL	Q9H628	205 aa		0.17	□□□□□ -2.38

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