RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 MRPS16Q9Y3D3 137 aaKnown RBP12.45□□□□□ -0.42
VEGFA-222ENST00000520948 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 M0QY20 66 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 GAGE1Q13065 139 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 GAGE4Q13068 117 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 GAGE5Q13069 117 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 KRTAP4-5Q9BYR2 181 aa12.44□□□□□ -0.42
VEGFA-222ENST00000520948 RIGQ13278 110 aa12.43□□□□□ -0.42
VEGFA-222ENST00000520948 ATP6V0E2Q8NHE4 81 aa12.43□□□□□ -0.42
VEGFA-222ENST00000520948 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
VEGFA-222ENST00000520948 MGPP08493 103 aa12.42□□□□□ -0.42
VEGFA-222ENST00000520948 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
VEGFA-222ENST00000520948 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 UBE2D3P61077 147 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 UBE2D2P62837 147 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
VEGFA-222ENST00000520948 C1orf134Q5TEV5 83 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
VEGFA-222ENST00000520948 CTDSP1Q9GZU7 261 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 GTSF1LQ9H1H1 148 aa12.41□□□□□ -0.42
VEGFA-222ENST00000520948 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
VEGFA-222ENST00000520948 FRZBQ92765 325 aa12.4□□□□□ -0.42
VEGFA-222ENST00000520948 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
VEGFA-222ENST00000520948 Q9H8V8 135 aa12.4□□□□□ -0.42
VEGFA-222ENST00000520948 A0A1B0GW15 77 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 H7C1H1 209 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 CLRN3Q8NCR9 226 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 DNAJC30Q96LL9 226 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 IMMP2LQ96T52 175 aa12.39□□□□□ -0.43
VEGFA-222ENST00000520948 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
VEGFA-222ENST00000520948 RAB4AP20338 218 aa12.38□□□□□ -0.43
VEGFA-222ENST00000520948 SLC7A5P1Q8MH63 180 aa12.38□□□□□ -0.43
VEGFA-222ENST00000520948 NIT2Q9NQR4 276 aa12.38□□□□□ -0.43
VEGFA-222ENST00000520948 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
VEGFA-222ENST00000520948 A0A087WWC5 75 aa12.37□□□□□ -0.43
VEGFA-222ENST00000520948 LELP1Q5T871 98 aa12.37□□□□□ -0.43
VEGFA-222ENST00000520948 TRAV26-2A0A0B4J265 109 aa12.36□□□□□ -0.43
VEGFA-222ENST00000520948 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
VEGFA-222ENST00000520948 ATP5L2Q7Z4Y8 100 aa12.36□□□□□ -0.43
VEGFA-222ENST00000520948 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
VEGFA-222ENST00000520948 HSPG2P98160 4391 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 SIVA1O15304 175 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 APOC3P02656 99 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 CAMPP49913 170 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 HBBP68871 147 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 TNP2Q05952 138 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 RHEBQ15382 184 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
VEGFA-222ENST00000520948 GAS8-AS1O95177 125 aa12.34□□□□□ -0.43
VEGFA-222ENST00000520948 WFDC10BQ8IUB3 73 aa12.34□□□□□ -0.43
VEGFA-222ENST00000520948 NBDYA0A0U1RRE5 68 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 C16orf90A8MZG2 172 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 S100A8P05109 93 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 NDUFA5Q16718 116 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 DAZ4Q86SG3 579 aaKnown RBP12.33□□□□□ -0.44
VEGFA-222ENST00000520948 RPL39LQ96EH5 51 aaKnown RBP12.33□□□□□ -0.44
VEGFA-222ENST00000520948 MRAP2Q96G30 205 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 BTF3L4Q96K17 158 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 RPS10P5Q9NQ39 176 aa12.33□□□□□ -0.44
VEGFA-222ENST00000520948 DAZ3Q9NR90 486 aaKnown RBP12.33□□□□□ -0.44
VEGFA-222ENST00000520948 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
VEGFA-222ENST00000520948 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
VEGFA-222ENST00000520948 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
VEGFA-222ENST00000520948 SVBPQ8N300 66 aa12.32□□□□□ -0.44
VEGFA-222ENST00000520948 TRAV9-1A0A075B6T8 112 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 TRAV8-6A0A0B4J262 113 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 IGHV3-38A0A0C4DH36 116 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 SNAPINO95295 136 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 NTM-AS1Q6ZSK4 140 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
VEGFA-222ENST00000520948 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
VEGFA-222ENST00000520948 OR10J3Q5JRS4 329 aa12.3□□□□□ -0.44
VEGFA-222ENST00000520948 KCNIP4Q6PIL6 250 aa12.3□□□□□ -0.44
VEGFA-222ENST00000520948 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
VEGFA-222ENST00000520948 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
VEGFA-222ENST00000520948 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
VEGFA-222ENST00000520948 MAPKAPK5-AS1Q8N8E1 139 aa12.29□□□□□ -0.44
VEGFA-222ENST00000520948 NRACQ8N912 160 aa12.29□□□□□ -0.44
VEGFA-222ENST00000520948 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-222ENST00000520948 SMKR1H3BMG3 65 aa12.28□□□□□ -0.44
VEGFA-222ENST00000520948 POLR2KP53803 58 aaKnown RBP12.28□□□□□ -0.44
VEGFA-222ENST00000520948 LINC01556Q5JQF7 62 aa12.28□□□□□ -0.44
VEGFA-222ENST00000520948 SDHAF1A6NFY7 115 aa12.27□□□□□ -0.45
VEGFA-222ENST00000520948 K7EP13 123 aa12.27□□□□□ -0.45
VEGFA-222ENST00000520948 TTC32Q5I0X7 151 aa12.27□□□□□ -0.45
VEGFA-222ENST00000520948 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 NCR2O95944 276 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 S100PP25815 95 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 ATRAIDQ6UW56 229 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 NIT1Q86X76 327 aa12.26□□□□□ -0.45
VEGFA-222ENST00000520948 URGCP-MRPS24S4R325 110 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms