RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 POM121L12Q8N7R1 296 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 BAALCQ8WXS3 180 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 RASL10AQ92737 203 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 FAM19A4Q96LR4 140 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 KIR2DL4Q99706 377 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 DAZ1Q9NQZ3 744 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-223ENST00000520520 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 K7EMT4 169 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 VCYO14598 125 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 IGHG2P01859 326 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 RNASE4P34096 147 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 ANXA2RQ3ZCQ2 193 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 PRR9Q5T870 116 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 C14orf178Q8N769 122 aaPredicted RBP6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 LINC01006Q8NI28 216 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 PRADC1Q9BSG0 188 aa6.48□□□□□ -1.37
CTNNA1-223ENST00000520520 IGHV4OR15-8A0A075B7B6 117 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 A0A087WW49 117 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 NDUFA7O95182 113 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 PF4V1P10720 104 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 PMVKQ15126 192 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 RHOHQ15669 191 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 TMEM219Q86XT9 240 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 C11orf44Q8N8P7 122 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 DLX4Q92988 240 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 MRPL16Q9NX20 251 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-223ENST00000520520 NOTCH1P46531 2555 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 TRBV6-5A0A0K0K1A5 114 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 TEX48A0A1B0GUV7 120 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 A6NDX4 124 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 LGALS1P09382 135 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 Q6ZSV7 163 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 RHPN1-AS1Q9BWJ2 59 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 TTTY13Q9BZ97 58 aa6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-223ENST00000520520 TRBV20-1A0A075B6N2 111 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 PRSS29PA6NIE9 313 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 C11orf86A6NJI1 115 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 KLLNB2CW77 178 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 J3KRW8 73 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 DUSP14O95147 198 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 PF4P02776 101 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 PROK1P58294 105 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 SNRPD3P62318 126 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 CD300EQ496F6 205 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 RPL39LQ96EH5 51 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 SIGMAR1Q99720 223 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 TP53TG1Q9Y2A0 90 aa6.45□□□□□ -1.38
CTNNA1-223ENST00000520520 TRGV11A0A075B6L2 103 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 LINC01548A6NM66 108 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 TMEM238C9JI98 176 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 H3BUX3 64 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 LGALS9O00182 355 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 RNASE3P12724 160 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 NSUN5P1Q3KNT7 163 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 SUMO4Q6EEV6 95 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 UNQ9165/PRO28630Q6UXU0 137 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 ZFP2Q6ZN57 461 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 TRPT1Q86TN4 253 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 WNK1Q9H4A3 2382 aa6.44□□□□□ -1.38
CTNNA1-223ENST00000520520 TRBV27A0A0K0K1C4 114 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 F5H697 171 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 H3BMG7 143 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 APOMO95445 188 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 IGLV1-40P01703 118 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 UBE2D1P51668 147 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 LY6EQ16553 131 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 MRAPQ8TCY5 172 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 SPATA25Q9BR10 227 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
CTNNA1-223ENST00000520520 A0A1B0GV72 72 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 GAGE12HA6NDE8 117 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 IGIPA6NJ69 53 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 IGHV3-11P01762 117 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 CD7P09564 240 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 POLR2KP53803 58 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 ZNF56Q15929 161 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 BEAN1Q3B7T3 259 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 MTURNQ8N3F0 131 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 PLEKHB2Q96CS7 222 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 VPREB3Q9UKI3 123 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 TSSC4Q9Y5U2 329 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
CTNNA1-223ENST00000520520 KMT2CQ8NEZ4 4911 aaKnown RBP6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 RYR3Q15413 4870 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 SDHAF1A6NFY7 115 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 GNRH2O43555 120 aa6.41□□□□□ -1.38
CTNNA1-223ENST00000520520 TRBV12-3P01733 135 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms