RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SH3BGRL3Q9H299 93 aa6.48□□□□□ -1.37
HDAC3-215ENST00000519474 TRGV2A0A075B6R0 118 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 B5MCH6 92 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-215ENST00000519474 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 GCHFRP30047 84 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 GNG5P63218 68 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 MEF2BQ02080 365 aaPredicted RBP6.47□□□□□ -1.37
HDAC3-215ENST00000519474 FHL2Q14192 279 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 GOLT1AQ6ZVE7 132 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 KCNRGQ8N5I3 272 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 CMTM2Q8TAZ6 248 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 SGK494Q96LW2 274 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 DERL1Q9BUN8 251 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 Q9H8V8 135 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 CYSLTR1Q9Y271 337 aa6.47□□□□□ -1.37
HDAC3-215ENST00000519474 A0A096LPF7 62 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 NBDYA0A0U1RRE5 68 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 SFTA3P0C7M3 94 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 ZNF726P1Q15940 193 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 CYTL1Q9NRR1 136 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 EPDR1Q9UM22 224 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 DNAH10Q8IVF4 4471 aa6.46□□□□□ -1.38
HDAC3-215ENST00000519474 FXYD6-FXYD2A0A087WZ82 144 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 KANTRA0A1W2PQU2 76 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 BCL2L11O43521 198 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 IGLV2-11P01706 119 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 IGHV3-53P01767 116 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 TRGC1P0CF51 173 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 SRIP30626 198 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 ZNF415Q09FC8 603 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 BATFQ16520 125 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 TDRG1Q3Y452 100 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 RASL10AQ92737 203 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 ANAPC13Q9BS18 74 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 TMEM242Q9NWH2 141 aa6.45□□□□□ -1.38
HDAC3-215ENST00000519474 IGHV3-16A0A0C4DH30 117 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 B4DEV8 164 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 J3KT08 172 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 PAX4O43316 350 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 CXorf1O96002 111 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 TCRAP04437 139 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 MALP21145 153 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 ZNF80P51504 273 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-215ENST00000519474 UFSP1Q6NVU6 142 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 BAALCQ8WXS3 180 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 C8orf49Q96NF6 230 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 C11orf21Q9P2W6 132 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 HHLA3Q9XRX5 114 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 MUC4Q99102 2169 aa6.44□□□□□ -1.38
HDAC3-215ENST00000519474 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 TRAV21A0A0B4J279 112 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 TAAR5O14804 337 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 HNRNPA3P51991 378 aaKnown RBP6.43□□□□□ -1.38
HDAC3-215ENST00000519474 TNP2Q05952 138 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
HDAC3-215ENST00000519474 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 LINC00479Q96M42 142 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-215ENST00000519474 SPANXDQ9BXN6 97 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 TMEM167BQ9NRX6 74 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
HDAC3-215ENST00000519474 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 GGTLC3B5MD39 225 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 K7EN84 100 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 SOHLH1Q5JUK2 328 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 FAM19A5Q7Z5A7 132 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-215ENST00000519474 KRTAP1-5Q9BYS1 174 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 DNAH6Q9C0G6 4158 aa6.42□□□□□ -1.38
HDAC3-215ENST00000519474 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 TRGV4A0A0C4DH28 118 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 M0R2P5 195 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 PRNTQ86SH4 94 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 SYT8Q8NBV8 401 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 MBD3L1Q8WWY6 194 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 KCNS1Q96KK3 526 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 ICOSQ9Y6W8 199 aa6.41□□□□□ -1.38
HDAC3-215ENST00000519474 A6NDN8 102 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 CTRLP40313 264 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 CRIP1P50238 77 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 ELOBQ15370 118 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 DPPA3Q6W0C5 159 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 ZNF575Q86XF7 245 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 CYB561D1Q8N8Q1 229 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 TMEM75Q8N9X5 138 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 FRZBQ92765 325 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 MLST8Q9BVC4 326 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 SDF2L1Q9HCN8 221 aa6.4□□□□□ -1.38
HDAC3-215ENST00000519474 TRAV4A0A0B4J268 109 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms