RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 TMEM223A0PJW6 202 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 K7EQG2 157 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 TGFAP01135 160 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 IGHV4-59P01825 116 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 LGALS3P17931 250 aaKnown RBP12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 C10orf126Q8N4M7 172 aa12.23□□□□□ -0.45
PCDHGA11-202ENST00000518882 SNRPD3P62318 126 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 RHOHQ15669 191 aa12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 TRPT1Q86TN4 253 aaKnown RBP12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 CDIP1Q9H305 208 aa12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 C20orf203Q8NBC4 194 aa12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 CARD19Q96LW7 228 aa12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 ZNF580Q9UK33 172 aa12.22□□□□□ -0.45
PCDHGA11-202ENST00000518882 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA11-202ENST00000518882 PRO1854Q9UHT4 67 aa12.21□□□□□ -0.45
PCDHGA11-202ENST00000518882 A4D1N5 150 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 LEPROTO15243 131 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 IGLV4-3A0A075B6K6 122 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 A0A0J9YXV3 536 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 RHODO00212 210 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 DEFB112Q30KQ8 113 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 LYRM7Q5U5X0 104 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 PRORYQ9H606 182 aa12.2□□□□□ -0.46
PCDHGA11-202ENST00000518882 PKD1L2Q7Z442 2459 aa12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 USP9XQ93008 2570 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 I3L3M4 83 aa12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 RAX2Q96IS3 184 aa12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 NACAE9PAV3 2078 aa12.19□□□□□ -0.46
PCDHGA11-202ENST00000518882 TRBV20-1A0A075B6N2 111 aa12.18□□□□□ -0.46
PCDHGA11-202ENST00000518882 TEN1Q86WV5 123 aa12.18□□□□□ -0.46
PCDHGA11-202ENST00000518882 CREBBPQ92793 2442 aa12.18□□□□□ -0.46
PCDHGA11-202ENST00000518882 SBSPONQ8IVN8 264 aa12.18□□□□□ -0.46
PCDHGA11-202ENST00000518882 TRAV2A0A0B4J234 112 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 B4DSR2 109 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 MXRA5Q9NR99 2828 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 CIDEAO60543 219 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 SCGB1C2P0DMR2 95 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 PROK1P58294 105 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
PCDHGA11-202ENST00000518882 USP9YO00507 2555 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 PPDPFLQ8WWR9 84 aa12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 VCX2Q9H322 139 aa12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 IGHV3-33P01772 117 aa12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 NRGNQ92686 78 aa12.16□□□□□ -0.46
PCDHGA11-202ENST00000518882 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
PCDHGA11-202ENST00000518882 A8MWV9 139 aa12.15□□□□□ -0.46
PCDHGA11-202ENST00000518882 PRM2P04554 102 aa12.15□□□□□ -0.46
PCDHGA11-202ENST00000518882 HTN1P15515 57 aa12.15□□□□□ -0.46
PCDHGA11-202ENST00000518882 ANKRD29Q8N6D5 301 aa12.15□□□□□ -0.46
PCDHGA11-202ENST00000518882 MT-ATP8P03928 68 aa12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 CEMP1Q6PRD7 247 aaPredicted RBP12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 Q9UF83 564 aa12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 ADARB2-AS1A8MUL3 147 aa12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 H7C2G1 150 aa12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 XGP55808 180 aa12.14□□□□□ -0.47
PCDHGA11-202ENST00000518882 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 SPXQ9BT56 116 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 M0R2P5 195 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 ELANEP08246 267 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
PCDHGA11-202ENST00000518882 ANKRD17O75179 2603 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 A0A1B0GV72 72 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 CRYBA4P53673 196 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 Q6ZUT4 128 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 RNF152Q8N8N0 203 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 TMEM89A2RUT3 159 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 CD28P10747 220 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 TCTEX1D4Q5JR98 221 aa12.12□□□□□ -0.47
PCDHGA11-202ENST00000518882 CKS1BP61024 79 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 POLQO75417 2590 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 C9JAW5 83 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 SLC25A20O43772 301 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 LITAFQ99732 161 aa12.11□□□□□ -0.47
PCDHGA11-202ENST00000518882 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
PCDHGA11-202ENST00000518882 Q6ZSN1 163 aa12.1□□□□□ -0.47
PCDHGA11-202ENST00000518882 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
PCDHGA11-202ENST00000518882 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
PCDHGA11-202ENST00000518882 GATA3P23771 443 aa12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 TIMM21Q9BVV7 248 aa12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 IGSF10Q6WRI0 2623 aa12.09□□□□□ -0.47
PCDHGA11-202ENST00000518882 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms