RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 CASKIN1Q8WXD9 1431 aa-1.92□□□□□ -2.72
SCARNA15-202ENST00000516881 PTPRMP28827 1452 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 PARP14Q460N5 1801 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 IBTKQ9P2D0 1353 aaPredicted RBP-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 TRAV2A0A0B4J234 112 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 M0QZK8 103 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 ATG12O94817 140 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 CST2P09228 141 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 PLGLB1Q02325 96 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 DYNLRB2Q8TF09 96 aa-1.93□□□□□ -2.72
SCARNA15-202ENST00000516881 MRPS15P82914 257 aaKnown RBP-1.94□□□□□ -2.72
SCARNA15-202ENST00000516881 UFC1Q9Y3C8 167 aa-1.94□□□□□ -2.72
SCARNA15-202ENST00000516881 PLECQ15149 4684 aaKnown RBP-1.94□□□□□ -2.72
SCARNA15-202ENST00000516881 CUBNO60494 3623 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 H0YJX3 145 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 S100A11P31949 105 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 SNX29P2Q8IUI4 249 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 ARL2BPQ9Y2Y0 163 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 NUP210Q8TEM1 1887 aaPredicted RBP-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 DNAH9Q9NYC9 4486 aa-1.95□□□□□ -2.72
SCARNA15-202ENST00000516881 PCF11O94913 1555 aaKnown RBP-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 MT1AP04731 61 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 TMEM91Q6ZNR0 172 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 STX19Q8N4C7 294 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 DYDC1Q8WWB3 177 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 AGPAT4-IT1Q9H0P7 198 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 SLC35B3Q9H1N7 401 aa-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 METTL1Q9UBP6 276 aaKnown RBP-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 KDM5AP29375 1690 aaKnown RBP-1.96□□□□□ -2.72
SCARNA15-202ENST00000516881 LAMA3Q16787 3333 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 NCR2O95944 276 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 HIST1H1BP16401 226 aaKnown RBP-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 COTL1Q14019 142 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 HSD17B12Q53GQ0 312 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 OR13C6PQ8NH95 151 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 PPP1R14BQ96C90 147 aa-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 NOP16Q9Y3C1 178 aaKnown RBP-1.97□□□□□ -2.72
SCARNA15-202ENST00000516881 XIRP1Q702N8 1843 aaKnown RBP-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 CCDC179H3BU77 68 aa-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 UQCRQO14949 82 aa-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 MAFIPQ8WZ33 124 aa-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 CBLN4Q9NTU7 201 aa-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 LAMTOR2Q9Y2Q5 125 aa-1.98□□□□□ -2.73
SCARNA15-202ENST00000516881 VPS13BQ7Z7G8 4022 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 SYS1-DBNDD2H3BUS1 97 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 SLC25A5P05141 298 aaKnown RBP-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 CCL7P80098 99 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 FAM24BQ8N5W8 94 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 DEFB123Q8N688 67 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 SMIM4Q8WVI0 70 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 PRAP1Q96NZ9 151 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 GINS3Q9BRX5 216 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 APLNQ9ULZ1 77 aa-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 USP9XQ93008 2570 aaPredicted RBP-1.99□□□□□ -2.73
SCARNA15-202ENST00000516881 NSD3Q9BZ95 1437 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 GAPVD1Q14C86 1478 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 NBASA2RRP1 2371 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 DOCK1Q14185 1865 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 BORCS7-ASMTA0A0B4J1R7 106 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 TRBV7-6A0A0J9YX20 115 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 Q6JHZ5 121 aa-2□□□□□ -2.73
SCARNA15-202ENST00000516881 CLPSL1A2RUU4 121 aa-2.01□□□□□ -2.73
SCARNA15-202ENST00000516881 TCRAP04437 139 aa-2.01□□□□□ -2.73
SCARNA15-202ENST00000516881 C9orf116Q5BN46 136 aaPredicted RBP-2.01□□□□□ -2.73
SCARNA15-202ENST00000516881 HRCT1Q6UXD1 115 aa-2.01□□□□□ -2.73
SCARNA15-202ENST00000516881 A2MP01023 1474 aa-2.01□□□□□ -2.73
SCARNA15-202ENST00000516881 ANK3Q12955 4377 aaKnown RBP-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 LRRC37A2A6NM11 1700 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 CTXND1A0A1B0GTU2 59 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 J3QLW9 94 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 RPL22P35268 128 aaKnown RBP-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 UBE2D1P51668 147 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 ATP6V0E2Q8NHE4 81 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 C10orf82Q8WW14 230 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 MED23Q9ULK4 1368 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 TEX15Q9BXT5 2789 aa-2.02□□□□□ -2.73
SCARNA15-202ENST00000516881 FER1L6Q2WGJ9 1857 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 AKAP13Q12802 2813 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 MYH2Q9UKX2 1941 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 H0YGG7 62 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 M0QX08 132 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 IFNA1P01562 189 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 IFNGP01579 166 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 CDKN2CP42773 168 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 PSPHP78330 225 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 DEFA5Q01523 94 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 CEP19Q96LK0 163 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 RPRMQ9NS64 109 aa-2.03□□□□□ -2.73
SCARNA15-202ENST00000516881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.03□□□□□ -2.74
SCARNA15-202ENST00000516881 ANKRD11Q6UB99 2663 aaPredicted RBP-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 ADCY9O60503 1353 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 PITX3O75364 302 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 RBP4P02753 201 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 COX8AP10176 69 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 KDM5CP41229 1560 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 TMEM170BQ5T4T1 132 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 RPL7L1Q6DKI1 246 aaKnown RBP-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 C9orf62Q8N4C0 152 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 STOML2Q9UJZ1 356 aa-2.04□□□□□ -2.74
SCARNA15-202ENST00000516881 TRAPPC2LQ9UL33 140 aa-2.04□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms