RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 COX8AP10176 69 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 UPK3BQ9BT76 320 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 NCOA6Q14686 2063 aaPredicted RBP4.46□□□□□ -1.7
USP38-203ENST00000511739 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 JMJD7-PLA2G4BH0Y9G9 81 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 IGLL1P15814 213 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 C11orf52Q96A22 123 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 DKK2Q9UBU2 259 aa4.46□□□□□ -1.7
USP38-203ENST00000511739 ZNF503-AS2A6NEH8 195 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 WT1P19544 449 aaPredicted RBP4.45□□□□□ -1.7
USP38-203ENST00000511739 LOXL1Q08397 574 aaPredicted RBP4.45□□□□□ -1.7
USP38-203ENST00000511739 ZNF664Q8N3J9 261 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 C20orf144Q9BQM9 153 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 FSHBP01225 129 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 LRRC75A-AS1Q8N1F1 130 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 H3BMG7 143 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 LECT2O14960 151 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 TMEM61Q8N0U2 210 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 MUC6Q6W4X9 2439 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 K7ERJ3 54 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 UFSP1Q6NVU6 142 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 PCP2Q8IVA1 136 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 V9GYV3 84 aa4.45□□□□□ -1.7
USP38-203ENST00000511739 TECTAO75443 2155 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 TRAV10A0A0B4J240 114 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 C12orf74Q32Q52 190 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 MAJINQ3KP22 176 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 C10orf91Q5T1B1 145 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 SPANXCQ9NY87 97 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 SORL1Q92673 2214 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 NDUFC2O95298 119 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 LINC00322Q6ZN03 302 aaPredicted RBP4.44□□□□□ -1.7
USP38-203ENST00000511739 Q6ZVH6 145 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 LINC01548A6NM66 108 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 GATA1P15976 413 aaPredicted RBP4.44□□□□□ -1.7
USP38-203ENST00000511739 POU2AF1Q16633 256 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 DAND5Q8N907 189 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 IGKV2D-26A0A0A0MRZ7 120 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 LYRM9A8MSI8 78 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 IGLV11-55A0A075B6I3 123 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 A0A0B4J2C4 111 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 REG3AQ06141 175 aa4.44□□□□□ -1.7
USP38-203ENST00000511739 SMIM9A6NGZ8 99 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 TMEM256-PLSCR3K7ERE1 68 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 BPY2O14599 106 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 FAM19A5Q7Z5A7 132 aaPredicted RBP4.43□□□□□ -1.7
USP38-203ENST00000511739 LINC00269Q8N2A0 174 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 C3orf22Q8N5N4 141 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 A0A1W2PPM0 123 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 ASPHD1Q5U4P2 390 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 ZNF706Q9Y5V0 76 aaPredicted RBP4.43□□□□□ -1.7
USP38-203ENST00000511739 SHANK1Q9Y566 2161 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 K7EP34 96 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 PDE6GP18545 87 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 UBE2D2P62837 147 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 MAP6D1Q9H9H5 199 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 MED14OSP0DP75 135 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 OTOGLQ3ZCN5 2332 aa4.43□□□□□ -1.7
USP38-203ENST00000511739 SIVA1O15304 175 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 K7EIM0 57 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 ADAMTS9Q9P2N4 1935 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 A4D1N5 150 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 SMIM20Q8N5G0 67 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 NUPR2A6NF83 97 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 I3L2K1 104 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 IGF1P05019 195 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 K7EP13 123 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 LY6G6DO95868 133 aa4.42□□□□□ -1.7
USP38-203ENST00000511739 POLR3KQ9Y2Y1 108 aaPredicted RBP4.42□□□□□ -1.7
USP38-203ENST00000511739 ACACBO00763 2458 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 MED13Q9UHV7 2174 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 RPL39P62891 51 aaKnown RBP4.41□□□□□ -1.7
USP38-203ENST00000511739 PRR15LQ9BU68 103 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 ATOX1O00244 68 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 MIFP14174 115 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 PYY3Q5JQD4 70 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 A6NDX4 124 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 TTC28Q96AY4 2481 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 CHD3Q12873 2000 aaKnown RBP4.41□□□□□ -1.7
USP38-203ENST00000511739 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
USP38-203ENST00000511739 LINC00482Q8N8I6 264 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 PTPN13Q12923 2485 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 P0DMU3 169 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 FAM231AP0DMU4 169 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 FAM231CP0DMU5 169 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 ADCYAP1P18509 176 aa4.41□□□□□ -1.7
USP38-203ENST00000511739 CHCHD10Q8WYQ3 142 aaPredicted RBP4.41□□□□□ -1.7
USP38-203ENST00000511739 SIRPDQ9H106 197 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms