RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 OR11H12B2RN74 326 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 MAPKAPK5-AS1Q8N8E1 139 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 OR11H2Q8NH07 326 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 PHLDA1Q8WV24 401 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 SPRY2O43597 315 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 CITED1Q99966 193 aa11.89□□□□□ -0.51
SQSTM1-213ENST00000510187 MYMXA0A1B0GTQ4 84 aa11.88□□□□□ -0.51
SQSTM1-213ENST00000510187 E9PLD3 99 aa11.88□□□□□ -0.51
SQSTM1-213ENST00000510187 PCP4P48539 62 aa11.88□□□□□ -0.51
SQSTM1-213ENST00000510187 CYSLTR1Q9Y271 337 aa11.88□□□□□ -0.51
SQSTM1-213ENST00000510187 EDN2P20800 178 aa11.87□□□□□ -0.51
SQSTM1-213ENST00000510187 SNRPD3P62318 126 aaKnown RBP11.87□□□□□ -0.51
SQSTM1-213ENST00000510187 PAPPA-AS1Q5QFB9 102 aa11.87□□□□□ -0.51
SQSTM1-213ENST00000510187 C9orf85Q96MD7 179 aa11.87□□□□□ -0.51
SQSTM1-213ENST00000510187 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 NAA38Q9BRA0 125 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 A0A0J9YX75 114 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 K7EQG2 157 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 VCYO14598 125 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 CD7P09564 240 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 SUMO4Q6EEV6 95 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 SYT8Q8NBV8 401 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
SQSTM1-213ENST00000510187 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
SQSTM1-213ENST00000510187 IGHV3-16A0A0C4DH30 117 aa11.85□□□□□ -0.51
SQSTM1-213ENST00000510187 RIPPLY3P57055 190 aa11.85□□□□□ -0.51
SQSTM1-213ENST00000510187 FBN1P35555 2871 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 TRAV12-3A0A0B4J271 114 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 A0A1B0GWB2 263 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 DUSP14O95147 198 aaKnown RBP11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 HIST1H4GQ99525 98 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
SQSTM1-213ENST00000510187 PF4P02776 101 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 ZFP2Q6ZN57 461 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 C3orf56Q8N813 242 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 VPS25Q9BRG1 176 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 TENM1Q9UKZ4 2725 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 K7ERJ3 54 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 PRADC1Q9BSG0 188 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 TP53TG1Q9Y2A0 90 aa11.83□□□□□ -0.52
SQSTM1-213ENST00000510187 HERVK_113P61574 105 aa11.82□□□□□ -0.52
SQSTM1-213ENST00000510187 WNK1Q9H4A3 2382 aa11.81□□□□□ -0.52
SQSTM1-213ENST00000510187 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
SQSTM1-213ENST00000510187 IGLL5B9A064 214 aa11.81□□□□□ -0.52
SQSTM1-213ENST00000510187 PMVKQ15126 192 aa11.81□□□□□ -0.52
SQSTM1-213ENST00000510187 MUC4Q99102 2169 aa11.81□□□□□ -0.52
SQSTM1-213ENST00000510187 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 TSHBP01222 138 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 CRYGDP07320 174 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 RHOHQ15669 191 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 FOXI2Q6ZQN5 318 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 A0A087WWL8 130 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 F5H697 171 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 JPT2Q9H910 190 aa11.8□□□□□ -0.52
SQSTM1-213ENST00000510187 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
SQSTM1-213ENST00000510187 TRPT1Q86TN4 253 aaKnown RBP11.79□□□□□ -0.52
SQSTM1-213ENST00000510187 LINC00482Q8N8I6 264 aa11.79□□□□□ -0.52
SQSTM1-213ENST00000510187 DYNLRB2Q8TF09 96 aa11.79□□□□□ -0.52
SQSTM1-213ENST00000510187 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
SQSTM1-213ENST00000510187 TMEM238LA0A1B0GVL6 79 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 A6NJY4 79 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 ZNF815PA8K554 130 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 G3V4G9 280 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 SAP30O75446 220 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 Q8N1Y9 231 aa11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
SQSTM1-213ENST00000510187 C11orf86A6NJI1 115 aa11.77□□□□□ -0.52
SQSTM1-213ENST00000510187 M0QY20 66 aa11.77□□□□□ -0.52
SQSTM1-213ENST00000510187 RRN3P1Q2M238 152 aa11.77□□□□□ -0.52
SQSTM1-213ENST00000510187 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
SQSTM1-213ENST00000510187 EDA2RQ9HAV5 297 aa11.77□□□□□ -0.53
SQSTM1-213ENST00000510187 MDFICQ9P1T7 246 aa11.77□□□□□ -0.53
SQSTM1-213ENST00000510187 ZNF56Q15929 161 aa11.76□□□□□ -0.53
SQSTM1-213ENST00000510187 DEFB114Q30KQ6 69 aa11.76□□□□□ -0.53
SQSTM1-213ENST00000510187 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
SQSTM1-213ENST00000510187 TRAV12-2A0A075B6T6 113 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 A8MTW9 85 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 C21orf62-AS1Q17RA5 79 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 FAM74A4Q5TZK3 123 aa11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 MORN3Q6PF18 240 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-213ENST00000510187 F8W1H4 67 aa11.74□□□□□ -0.53
SQSTM1-213ENST00000510187 RPL39P62891 51 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms