RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 CCL26Q9Y258 94 aa3.6□□□□□ -1.83
LINC01088-205ENST00000509088 PCNX2A6NKB5 2137 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 SEC16AO15027 2179 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 IGLV3-12A0A075B6K2 115 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 IGLV4-3A0A075B6K6 122 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 IGKV1D-37A0A075B6S9 117 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 TRAV26-2A0A0B4J265 109 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 A0A1W2PPR1 153 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 TMEM89A2RUT3 159 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 LYRM9A8MSI8 78 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 ZNF22P17026 224 aaPredicted RBP3.59□□□□□ -1.83
LINC01088-205ENST00000509088 CRIP1P50238 77 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 DAZ2Q13117 558 aaKnown RBP3.59□□□□□ -1.83
LINC01088-205ENST00000509088 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 C16orf47Q6ZP98 133 aaPredicted RBP3.59□□□□□ -1.83
LINC01088-205ENST00000509088 ZNF826PQ6ZT77 177 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 FAM19A1Q7Z5A9 133 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 CTSZQ9UBR2 303 aa3.59□□□□□ -1.83
LINC01088-205ENST00000509088 RPUSD1Q9UJJ7 312 aaKnown RBP3.59□□□□□ -1.83
LINC01088-205ENST00000509088 PRRC2AP48634 2157 aaKnown RBP3.59□□□□□ -1.84
LINC01088-205ENST00000509088 CABIN1Q9Y6J0 2220 aa3.59□□□□□ -1.84
LINC01088-205ENST00000509088 INTS1Q8N201 2190 aaKnown RBP3.58□□□□□ -1.84
LINC01088-205ENST00000509088 TRAV41A0A0B4J266 112 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 PLAC8L1A1L4L8 177 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 IQCF6A8MYZ5 107 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 CXCL13O43927 109 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 SCRG1O75711 98 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 OXTP01178 125 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV1-69P01742 117 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 NBL1P41271 181 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 ZNF80P51504 273 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-205ENST00000509088 KLKP1Q107X0 134 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 RHOHQ15669 191 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-205ENST00000509088 CD177Q8N6Q3 437 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 C10orf105Q8TEF2 133 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 C16orf95Q9H693 158 aa3.58□□□□□ -1.84
LINC01088-205ENST00000509088 COX7A2LO14548 114 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 NDUFB3O43676 98 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 MRPL33O75394 65 aaKnown RBP3.57□□□□□ -1.84
LINC01088-205ENST00000509088 ERC2-IT1O76042 136 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 DNAL4O96015 105 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 DNAH10OSP0CZ25 163 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 KNTC1P50748 2209 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 GFERP55789 205 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
LINC01088-205ENST00000509088 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 C2orf66Q6UXQ4 117 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 MUSTN1Q8IVN3 82 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 DYNAPQ8N1N2 210 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 DYNLRB2Q8TF09 96 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 BRK1Q8WUW1 75 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 AMELXQ99217 191 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 DEFB126Q9BYW3 111 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
LINC01088-205ENST00000509088 PRRC2BQ5JSZ5 2229 aaKnown RBP3.56□□□□□ -1.84
LINC01088-205ENST00000509088 MED12Q93074 2177 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV1OR21-1A0A087WYE8 117 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV1-58A0A0C4DH39 117 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 SMKR1H3BMG3 65 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 H3BRN7 92 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 CGB3P0DN86 165 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 CGB7P0DN87 165 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 XCL1P47992 114 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 FXYD7P58549 80 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 MIAQ16674 131 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 DEFB110Q30KQ9 67 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 MRPL55Q7Z7F7 128 aaKnown RBP3.56□□□□□ -1.84
LINC01088-205ENST00000509088 TMEM61Q8N0U2 210 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 KLF14Q8TD94 323 aaPredicted RBP3.56□□□□□ -1.84
LINC01088-205ENST00000509088 SMCR5Q8TEV8 140 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 IMMP1LQ96LU5 166 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 DAZ1Q9NQZ3 744 aaKnown RBP3.56□□□□□ -1.84
LINC01088-205ENST00000509088 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 C2orf16Q68DN1 1984 aa3.56□□□□□ -1.84
LINC01088-205ENST00000509088 A0A0C4DFX4 3053 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 NACAE9PAV3 2078 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 RAI1Q7Z5J4 1906 aaPredicted RBP3.55□□□□□ -1.84
LINC01088-205ENST00000509088 TRAV8-3A0A0A6YYJ7 113 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 IGHV1OR15-9A0A0B4J2B8 117 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 RPL37AP8A6NKH3 93 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 I3L3M4 83 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 CCKP06307 115 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 UBE2E1P51965 193 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 CCL14Q16627 93 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 RPL39P5Q59GN2 51 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 ZNF833PQ6ZTB9 187 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 KLHL30-AS1Q8NEE0 82 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 OCR1Q9BZK8 76 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 TNCP24821 2201 aa3.55□□□□□ -1.84
LINC01088-205ENST00000509088 PDE4DIPQ5VU43 2346 aa3.54□□□□□ -1.84
LINC01088-205ENST00000509088 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms