RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ANKHD1Q8IWZ3 2542 aaKnown RBP5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 LINC01546A6NGU7 62 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 P0DMU3 169 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 PSMG4Q5JS54 123 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 Q8N2B8 174 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 PSMG3-AS1Q96PY0 264 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 ZFHX2Q9C0A1 2572 aaPredicted RBP5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 TRBV6-1A0A0K0K1D8 114 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 C17orf100A8MU93 164 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 G3V318 75 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 RPL35AP18077 110 aaKnown RBP5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 OR13C6PQ8NH95 151 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
LIMCH1-207ENST00000508466 JMJD1CQ15652 2540 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 CENPEQ02224 2701 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 SDHAF1A6NFY7 115 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 UQCRQO14949 82 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 IGLV1-44P01699 117 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 TRACP01848 142 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 DAZ2Q13117 558 aaKnown RBP5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 DAZ4Q86SG3 579 aaKnown RBP5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 GPHB5Q86YW7 130 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 C20orf173Q96LM9 149 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 DAZ1Q9NQZ3 744 aaKnown RBP5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 DAZ3Q9NR90 486 aaKnown RBP5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 ITPR1Q14643 2758 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 A0A0G2JNJ9 132 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 TINCRA0A1B0GVN0 87 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 IGIPA6NJ69 53 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 OVOL1O14753 267 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 HIST1H4AP62805 103 aaKnown RBP5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 FAM223AQ8IWN6 122 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 CNFNQ9BYD5 112 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 Q9UFV3 132 aa5.43□□□□□ -1.54
LIMCH1-207ENST00000508466 CRYGBP07316 175 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 COX6CP09669 75 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 HILS1P60008 231 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 C15orf32Q32M92 178 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 PVRIGQ6DKI7 326 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 SEM1Q6ZVN7 128 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 MDS2Q8NDY4 140 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 FDCSPQ8NFU4 85 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 KRTAP3-2Q9BYR7 98 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 TRAV12-2A0A075B6T6 113 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 IGHV3-30-3P0DP02 117 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 DKK4Q9UBT3 224 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 PTPN13Q12923 2485 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 TRBV7-1A0A0A6YYK4 115 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 LINC01619G3V211 115 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 PROK1P58294 105 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 VMO1Q7Z5L0 202 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 DPH3P1Q9H4G8 78 aa5.42□□□□□ -1.54
LIMCH1-207ENST00000508466 CELSR2Q9HCU4 2923 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 KNCNA6PVL3 124 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 COX7CP15954 63 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 TIRAPP58753 221 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 PDE6HQ13956 83 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 SUMO4Q6EEV6 95 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 PIMREGQ9BSJ6 248 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 C2orf48Q96LS8 159 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 SLC50A1Q9BRV3 221 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 MYO9AB2RTY4 2548 aa5.41□□□□□ -1.54
LIMCH1-207ENST00000508466 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 IGHV3-38A0A0C4DH36 116 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 TMEM178BH3BS89 294 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 SYNJ2BPP57105 145 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 DYNLRB1Q9NP97 96 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 C14orf132Q9NPU4 83 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 NDUFA12Q9UI09 145 aa5.4□□□□□ -1.54
LIMCH1-207ENST00000508466 TRBV7-7A0A0K0K1E9 115 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 BUB3O43684 328 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 SLPIP03973 132 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 ATP5G1P05496 136 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 RNASE1P07998 156 aaKnown RBP5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 TMEM219Q86XT9 240 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 PYGO1Q9Y3Y4 419 aa5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 HRNRQ86YZ3 2850 aaPredicted RBP5.4□□□□□ -1.55
LIMCH1-207ENST00000508466 TRBV30A0A0K0K1B3 111 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 IGHV3-11P01762 117 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 ZNF876PQ49A33 203 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 Q5XG85 94 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 LRRC75A-AS1Q8N1F1 130 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 FAM218AQ96MZ4 157 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 LINC00574Q9H8X3 128 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 TRAV23DV6A0A075B6W5 121 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 IGHV3OR16-10A0A075B7F0 116 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 J3QLI3 93 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 NBR2O15453 112 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 BSPH1Q075Z2 132 aa5.39□□□□□ -1.55
LIMCH1-207ENST00000508466 TIMM21Q9BVV7 248 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms