RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
SMN1-204ENST00000506163 A8MWL6 223 aa12□□□□□ -0.49
SMN1-204ENST00000506163 TWIST1Q15672 202 aa12□□□□□ -0.49
SMN1-204ENST00000506163 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
SMN1-204ENST00000506163 CT83Q5H943 113 aa12□□□□□ -0.49
SMN1-204ENST00000506163 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
SMN1-204ENST00000506163 ISOC2Q96AB3 205 aa12□□□□□ -0.49
SMN1-204ENST00000506163 PGLYRP4Q96LB8 373 aa12□□□□□ -0.49
SMN1-204ENST00000506163 V9GYV3 84 aa12□□□□□ -0.49
SMN1-204ENST00000506163 A0A087WWC5 75 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 IFITM2Q01629 132 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 SMDT1Q9H4I9 107 aa11.99□□□□□ -0.49
SMN1-204ENST00000506163 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 DPH3P1Q9H4G8 78 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 KIAA1109Q2LD37 5005 aa11.98□□□□□ -0.49
SMN1-204ENST00000506163 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 NIT1Q86X76 327 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 NAT8Q9UHE5 227 aa11.97□□□□□ -0.49
SMN1-204ENST00000506163 DAZ4Q86SG3 579 aaKnown RBP11.96□□□□□ -0.49
SMN1-204ENST00000506163 DAZ3Q9NR90 486 aaKnown RBP11.96□□□□□ -0.49
SMN1-204ENST00000506163 HIGD1CA8MV81 97 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 KRTAP10-2P60368 255 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 ADIRFQ15847 76 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
SMN1-204ENST00000506163 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 RASL11AQ6T310 242 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 Q9HAA7 133 aa11.94□□□□□ -0.5
SMN1-204ENST00000506163 FAM231BA6NCW3 169 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 H7C1H1 209 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMN1-204ENST00000506163 CLLU1Q5K131 121 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 C15orf54Q8N8G6 183 aa11.93□□□□□ -0.5
SMN1-204ENST00000506163 GAS8-AS1O95177 125 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 RAB14P61106 215 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 NIT2Q9NQR4 276 aa11.92□□□□□ -0.5
SMN1-204ENST00000506163 HERC2O95714 4834 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 A0A087WTM6 91 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 A0A1B0GUT8 65 aa11.91□□□□□ -0.5
SMN1-204ENST00000506163 LAGE3Q14657 143 aa11.9□□□□□ -0.5
SMN1-204ENST00000506163 RPL39LQ96EH5 51 aaKnown RBP11.9□□□□□ -0.5
SMN1-204ENST00000506163 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
SMN1-204ENST00000506163 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 LRCOL1A6NCL2 159 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 KLK12Q9UKR0 248 aa11.89□□□□□ -0.51
SMN1-204ENST00000506163 C16orf90A8MZG2 172 aa11.88□□□□□ -0.51
SMN1-204ENST00000506163 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
SMN1-204ENST00000506163 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 SMIM15Q7Z3B0 74 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 MAPKAPK5-AS1Q8N8E1 139 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 CHCHD5Q9BSY4 110 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 TMEM191AQ9H0A3 160 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 URGCP-MRPS24S4R325 110 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 RYR1P21817 5038 aa11.87□□□□□ -0.51
SMN1-204ENST00000506163 A0A087WX48 190 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 ATRAIDQ6UW56 229 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 Q8N976 141 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 NAT8BQ9UHF3 227 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TRAV8-3A0A0A6YYJ7 113 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 RAB4AP20338 218 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 GAGE6Q13070 117 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
SMN1-204ENST00000506163 FRZBQ92765 325 aa11.86□□□□□ -0.51
SMN1-204ENST00000506163 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 RIGQ13278 110 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 WFDC2Q14508 124 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 ENHOQ6UWT2 76 aa11.85□□□□□ -0.51
SMN1-204ENST00000506163 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 PSCAO43653 123 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 RPS10P46783 165 aaKnown RBP11.84□□□□□ -0.51
SMN1-204ENST00000506163 UBE2WQ96B02 151 aa11.84□□□□□ -0.51
SMN1-204ENST00000506163 RBX1P62877 108 aa11.83□□□□□ -0.52
SMN1-204ENST00000506163 ADCYAP1P18509 176 aa11.82□□□□□ -0.52
SMN1-204ENST00000506163 KCNIP4Q6PIL6 250 aa11.82□□□□□ -0.52
SMN1-204ENST00000506163 TRBV6-5A0A0K0K1A5 114 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 SDHAF1A6NFY7 115 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 ELOBQ15370 118 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 TM2D2Q9BX73 214 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
SMN1-204ENST00000506163 APOBP04114 4563 aaKnown RBP11.8□□□□□ -0.52
SMN1-204ENST00000506163 HSPG2P98160 4391 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms