RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 DGAT2L7PQ6IED9 249 aa8.01□□□□□ -1.13
TRAPPC12-223ENST00000497597 NUP37Q8NFH4 326 aa8.01□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGHV7-81A0A0B4J1V7 117 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 C8orf31Q8N9H6 132 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 A0A0J9YXY3 114 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 CLPSL1A2RUU4 121 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 PPP1R17O96001 155 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 LY6EQ16553 131 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 NSUN5P1Q3KNT7 163 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 OTOGLQ3ZCN5 2332 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 PF4V1P10720 104 aa8□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 hADV29S1A0JD25 119 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 M0R1W7 72 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 RNF5Q99942 180 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGHV3-38A0A0C4DH36 116 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 LEPROTO15243 131 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGHV3-30-3P0DP02 117 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 RHOHQ15669 191 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGF2RP11717 2491 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 I3L3M4 83 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 KAAG1Q9UBP8 84 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 TRBV12-3P01733 135 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 P0DMU3 169 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 UNQ9165/PRO28630Q6UXU0 137 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 TMEM141Q96I45 108 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 IGKV3OR2-268A0A0C4DH90 116 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 NXPH4O95158 308 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 C9orf139Q6ZV77 190 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 ZFAND2AQ8N6M9 145 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 USP9YO00507 2555 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 A0A0B4J2C4 111 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 SYNJ2BPP57105 145 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 CCDC140Q96MF4 163 aa7.97□□□□□ -1.13
TRAPPC12-223ENST00000497597 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.13
TRAPPC12-223ENST00000497597 GPHB5Q86YW7 130 aa7.96□□□□□ -1.13
TRAPPC12-223ENST00000497597 TLN2Q9Y4G6 2542 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 B9A039 149 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 NDUFA7O95182 113 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 COX8CQ7Z4L0 72 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 FAM19A5Q7Z5A7 132 aaPredicted RBP7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 Q9HAA7 133 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGHV1-69DA0A0B4J2H0 117 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 RNASE1P07998 156 aaKnown RBP7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 TMEM190Q8WZ59 177 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 MDFICQ9P1T7 246 aa7.96□□□□□ -1.14
TRAPPC12-223ENST00000497597 MUC4Q99102 2169 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 TMEM223A0PJW6 202 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 LINC01587Q99440 93 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 CSMD2Q7Z408 3487 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 GRNP28799 593 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 SPINK13Q1W4C9 94 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 Q6Q795 121 aa7.95□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGKV2-29A2NJV5 120 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 H3BT86 120 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 OVOL1O14753 267 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 C3orf22Q8N5N4 141 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 TIMM17AQ99595 171 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 J3KT08 172 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 BAALC-AS2P0C853 105 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 Q8N9W7 124 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 NPBQ8NG41 125 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
TRAPPC12-223ENST00000497597 IGHV3-16A0A0C4DH30 117 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 LY6LH3BQJ8 138 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 FAM110DQ8TAY7 271 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 TRBV30A0A0K0K1B3 111 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DNAL4O96015 105 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DAZ4Q86SG3 579 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 OR13C6PQ8NH95 151 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DAZ1Q9NQZ3 744 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 DAZ3Q9NR90 486 aaKnown RBP7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 A0A1B0GX51 115 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 PRM2P04554 102 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
TRAPPC12-223ENST00000497597 POLR2KP53803 58 aaKnown RBP7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 PROK1P58294 105 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 BRD3OSQ6XYD6 125 aa7.92□□□□□ -1.14
TRAPPC12-223ENST00000497597 LY6G5BQ8NDX9 201 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms