RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
CTDSP1-213ENST00000496785 DNAJC30Q96LL9 226 aa13.09□□□□□ -0.31
CTDSP1-213ENST00000496785 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
CTDSP1-213ENST00000496785 TNFRSF18Q9Y5U5 241 aa13.08□□□□□ -0.32
CTDSP1-213ENST00000496785 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
CTDSP1-213ENST00000496785 DAZ4Q86SG3 579 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-213ENST00000496785 DAZ3Q9NR90 486 aaKnown RBP13.07□□□□□ -0.32
CTDSP1-213ENST00000496785 A0A1B0GUT8 65 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 M0QY20 66 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 SUMO4Q6EEV6 95 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 RASL11AQ6T310 242 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 URGCP-MRPS24S4R325 110 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 V9GYV3 84 aa13.06□□□□□ -0.32
CTDSP1-213ENST00000496785 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
CTDSP1-213ENST00000496785 FRZBQ92765 325 aa13.05□□□□□ -0.32
CTDSP1-213ENST00000496785 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
CTDSP1-213ENST00000496785 DNAH10Q8IVF4 4471 aa13.04□□□□□ -0.32
CTDSP1-213ENST00000496785 PKIAP61925 76 aa13.04□□□□□ -0.32
CTDSP1-213ENST00000496785 LAGE3Q14657 143 aa13.04□□□□□ -0.32
CTDSP1-213ENST00000496785 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
CTDSP1-213ENST00000496785 TRBV6-8A0A0A6YYG3 113 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 A0A1B0GVY2 172 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 TNP2Q05952 138 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 RIGQ13278 110 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 NIT2Q9NQR4 276 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 NAT8BQ9UHF3 227 aa13.03□□□□□ -0.32
CTDSP1-213ENST00000496785 IBA57-AS1B1ANH7 110 aa13.02□□□□□ -0.33
CTDSP1-213ENST00000496785 IFITM2Q01629 132 aa13.02□□□□□ -0.33
CTDSP1-213ENST00000496785 A0A087WX48 190 aa13.01□□□□□ -0.33
CTDSP1-213ENST00000496785 ELOBQ15370 118 aa13.01□□□□□ -0.33
CTDSP1-213ENST00000496785 PPP1R2P9O14990 202 aa13□□□□□ -0.33
CTDSP1-213ENST00000496785 UQCC3Q6UW78 93 aa13□□□□□ -0.33
CTDSP1-213ENST00000496785 Q6ZRN7 208 aaPredicted RBP13□□□□□ -0.33
CTDSP1-213ENST00000496785 NIT1Q86X76 327 aa13□□□□□ -0.33
CTDSP1-213ENST00000496785 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
CTDSP1-213ENST00000496785 TRBV25-1A0A075B6N4 114 aa12.99□□□□□ -0.33
CTDSP1-213ENST00000496785 EREGO14944 169 aa12.99□□□□□ -0.33
CTDSP1-213ENST00000496785 NUP35Q8NFH5 326 aa12.99□□□□□ -0.33
CTDSP1-213ENST00000496785 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
CTDSP1-213ENST00000496785 TRAV8-3A0A0A6YYJ7 113 aa12.98□□□□□ -0.33
CTDSP1-213ENST00000496785 A0A1B0GW15 77 aa12.98□□□□□ -0.33
CTDSP1-213ENST00000496785 SMIM27A0A1W2PRY6 76 aa12.98□□□□□ -0.33
CTDSP1-213ENST00000496785 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
CTDSP1-213ENST00000496785 IGHV1-24A0A0C4DH33 117 aa12.97□□□□□ -0.33
CTDSP1-213ENST00000496785 PSCAO43653 123 aa12.97□□□□□ -0.33
CTDSP1-213ENST00000496785 GATD1Q8NB37 220 aa12.97□□□□□ -0.33
CTDSP1-213ENST00000496785 TMEM262E9PQX1 116 aa12.96□□□□□ -0.33
CTDSP1-213ENST00000496785 S100A8P05109 93 aa12.96□□□□□ -0.33
CTDSP1-213ENST00000496785 IQCJQ1A5X6 159 aa12.96□□□□□ -0.33
CTDSP1-213ENST00000496785 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
CTDSP1-213ENST00000496785 Q9HAA7 133 aa12.96□□□□□ -0.33
CTDSP1-213ENST00000496785 BIRC6Q9NR09 4857 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 DNAH2Q9P225 4427 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 TRAV26-2A0A0B4J265 109 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 MT-ND4LP03901 98 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 COTL1Q14019 142 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 RMI2Q96E14 147 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 MRAP2Q96G30 205 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 COX11Q9Y6N1 276 aa12.95□□□□□ -0.34
CTDSP1-213ENST00000496785 NTM-AS1Q6ZSK4 140 aa12.94□□□□□ -0.34
CTDSP1-213ENST00000496785 ANAPC16Q96DE5 110 aa12.94□□□□□ -0.34
CTDSP1-213ENST00000496785 PPP1R17O96001 155 aa12.93□□□□□ -0.34
CTDSP1-213ENST00000496785 DNAH17Q9UFH2 4485 aa12.93□□□□□ -0.34
CTDSP1-213ENST00000496785 Q0VG73 95 aa12.92□□□□□ -0.34
CTDSP1-213ENST00000496785 Q8N3U1 123 aa12.92□□□□□ -0.34
CTDSP1-213ENST00000496785 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
CTDSP1-213ENST00000496785 KLK12Q9UKR0 248 aa12.92□□□□□ -0.34
CTDSP1-213ENST00000496785 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 NCR2O95944 276 aa12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 RAB4AP20338 218 aa12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 HBBP68871 147 aa12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 AMN1Q8IY45 258 aa12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 RPL39LQ96EH5 51 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-213ENST00000496785 TMEM218A2RU14 115 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 SDHAF1A6NFY7 115 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 F8W036 122 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 CRPP02741 224 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 AMTP48728 403 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 MPV17L2Q567V2 206 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 ATP5L2Q7Z4Y8 100 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 HECTD4Q9Y4D8 3996 aa12.9□□□□□ -0.34
CTDSP1-213ENST00000496785 A0A087WTM6 91 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 UBE2L6O14933 153 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 ANGP03950 147 aaKnown RBP12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 CAMPP49913 170 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 SPATA12Q7Z6I5 190 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 UBE2WQ96B02 151 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 ST20Q9HBF5 79 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
CTDSP1-213ENST00000496785 C16orf90A8MZG2 172 aa12.88□□□□□ -0.35
CTDSP1-213ENST00000496785 GAGE6Q13070 117 aa12.88□□□□□ -0.35
CTDSP1-213ENST00000496785 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
CTDSP1-213ENST00000496785 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms