RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 LINC00694P0DN24 101 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 GCHFRP30047 84 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 RRAS2P62070 204 aaPredicted RBP0.05□□□□□ -2.4
CD46-218ENST00000496723 Q6ZRX8 168 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 Q6ZUT4 128 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 COPZ2Q9P299 210 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 LRRC37A3O60309 1634 aa0.05□□□□□ -2.4
CD46-218ENST00000496723 UNC79Q9P2D8 2635 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 DOCK2Q92608 1830 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 WNK3Q9BYP7 1800 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 IL5P05113 134 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 EDDM3BP56851 147 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 INSL4Q14641 139 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 C9orf116Q5BN46 136 aaPredicted RBP0.04□□□□□ -2.4
CD46-218ENST00000496723 SCIMPQ6UWF3 145 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 MYH7P12883 1935 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
CD46-218ENST00000496723 GOLGA3Q08378 1498 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 WNK2Q9Y3S1 2297 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 NCOR1O75376 2440 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 LRP1Q07954 4544 aaKnown RBP0.03□□□□□ -2.4
CD46-218ENST00000496723 TRGV1A0A0A0MS02 117 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 TSTD1Q8NFU3 115 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 C10orf82Q8WW14 230 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 MAFIPQ8WZ33 124 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 SPTSSAQ969W0 71 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 U3KQA8 63 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 PRDM2Q13029 1718 aa0.03□□□□□ -2.4
CD46-218ENST00000496723 APOC4-APOC2K7ER74 178 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 SNCGO76070 127 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 SMIM6P0DI80 62 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 UBE2D1P51668 147 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 UBE2G1P62253 170 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 ALX1Q15699 326 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 SMIM21Q3B7S5 101 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 TCEAL4Q96EI5 215 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 TPT1P8Q9HAU6 139 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 ANKRD17O75179 2603 aaKnown RBP0.02□□□□□ -2.41
CD46-218ENST00000496723 IBTKQ9P2D0 1353 aaPredicted RBP0.02□□□□□ -2.41
CD46-218ENST00000496723 MYOM3Q5VTT5 1437 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 CHD9Q3L8U1 2897 aa0.02□□□□□ -2.41
CD46-218ENST00000496723 PLXNB2O15031 1838 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 PI4KAP42356 2102 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 PLCE1Q9P212 2302 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 SPTBN2O15020 2390 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 FAM208BQ5VWN6 2430 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 NPFFO15130 113 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 CBLN1P23435 193 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 GUCA1AP43080 201 aaPredicted RBP0.01□□□□□ -2.41
CD46-218ENST00000496723 ZNF818PQ6ZRF7 136 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 UBE2DNLQ8IWF7 75 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 ANP32BQ92688 251 aaKnown RBP0.01□□□□□ -2.41
CD46-218ENST00000496723 PATJQ8NI35 1801 aa0.01□□□□□ -2.41
CD46-218ENST00000496723 TRAV1-2A0A0B4J238 106 aa0□□□□□ -2.41
CD46-218ENST00000496723 TRBV10-3A0A0K0K1G6 114 aa0□□□□□ -2.41
CD46-218ENST00000496723 ZNF292O60281 2723 aa0□□□□□ -2.41
CD46-218ENST00000496723 PITX3O75364 302 aa0□□□□□ -2.41
CD46-218ENST00000496723 NDUFB6O95139 128 aa0□□□□□ -2.41
CD46-218ENST00000496723 IFITM1P13164 125 aa0□□□□□ -2.41
CD46-218ENST00000496723 COPZ1P61923 177 aa0□□□□□ -2.41
CD46-218ENST00000496723 KDM3BQ7LBC6 1761 aa0□□□□□ -2.41
CD46-218ENST00000496723 KCNRGQ8N5I3 272 aa0□□□□□ -2.41
CD46-218ENST00000496723 ABCA2Q9BZC7 2435 aa0□□□□□ -2.41
CD46-218ENST00000496723 TCHHQ07283 1943 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 BIVM-ERCC5R4GMW8 1640 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 FAM92AA1XBS5 289 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 RPS25P62851 125 aaKnown RBP-0.01□□□□□ -2.41
CD46-218ENST00000496723 SMCO1Q147U7 214 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 SPTSSBQ8NFR3 76 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 PFDN5Q99471 154 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 WFDC6Q9BQY6 131 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 TMEM191AQ9H0A3 160 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 DOCK1Q14185 1865 aa-0.01□□□□□ -2.41
CD46-218ENST00000496723 KMT2AQ03164 3969 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 CLPSL1A2RUU4 121 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 ZNF815PA8K554 130 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 PIN1P1O15428 100 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 S100A7L2Q5SY68 101 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 SSBP3-AS1Q7Z2R9 100 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 BAGE3Q86Y29 109 aa-0.02□□□□□ -2.41
CD46-218ENST00000496723 ZNF518AQ6AHZ1 1483 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 PXDNQ92626 1479 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 C2CD3Q4AC94 2353 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 A0A0D9SFI3 127 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 CCL8P80075 99 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 Q5VV11 94 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 SEC11CQ9BY50 192 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 CNFNQ9BYD5 112 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 CCDC167Q9P0B6 97 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 PAIP2BQ9ULR5 123 aaKnown RBP-0.03□□□□□ -2.41
CD46-218ENST00000496723 PKDREJQ9NTG1 2253 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 GRIN2AQ12879 1464 aa-0.03□□□□□ -2.41
CD46-218ENST00000496723 ZNF609O15014 1411 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 CASKIN1Q8WXD9 1431 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 AKAP6Q13023 2319 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 PTPRQQ9UMZ3 2332 aa-0.04□□□□□ -2.42
CD46-218ENST00000496723 NHSL1Q5SYE7 1610 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms