RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FXYD7P58549 80 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 RHOHQ15669 191 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 BATFQ16520 125 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 NSUN5P1Q3KNT7 163 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 ZNF876PQ49A33 203 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 TMEM97Q5BJF2 176 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 PAPPA-AS1Q5QFB9 102 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 SUMO4Q6EEV6 95 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 MORN3Q6PF18 240 aaPredicted RBP5.11□□□□□ -1.59
USP39-219ENST00000496047 Q6ZQT7 251 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 RASL10AQ92737 203 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 PTH2Q96A98 100 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 SCGB3A1Q96QR1 104 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 LINC01587Q99440 93 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 CSTL1Q9H114 145 aa5.11□□□□□ -1.59
USP39-219ENST00000496047 A0A087WWL8 130 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 TRBV6-5A0A0K0K1A5 114 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 hDV102S1A0JD36 115 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 HTN1P15515 57 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 FLNAP21333 2647 aaKnown RBP5.1□□□□□ -1.59
USP39-219ENST00000496047 INSL3P51460 131 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 PROK1P58294 105 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 COL5A1-AS1Q5SY13 56 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 C2orf66Q6UXQ4 117 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 C12orf54Q6X4T0 127 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 GTSCR1Q86UQ5 136 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 PRIMA1Q86XR5 153 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 TOMM6Q96B49 74 aa5.1□□□□□ -1.59
USP39-219ENST00000496047 RPL39LQ96EH5 51 aaKnown RBP5.1□□□□□ -1.59
USP39-219ENST00000496047 ZNF256Q9Y2P7 627 aaPredicted RBP5.1□□□□□ -1.59
USP39-219ENST00000496047 ACANP16112 2415 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 PKD1L1Q8TDX9 2849 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 SDHAF1A6NFY7 115 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 COX8AP10176 69 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 HERVK_113P61574 105 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 SMAGPQ0VAQ4 97 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 ODF3L2Q3SX64 289 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 DNAJC30Q96LL9 226 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 ZMAT4Q9H898 229 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 EDA2RQ9HAV5 297 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 MDFICQ9P1T7 246 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 TNFRSF18Q9Y5U5 241 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 KIF25-AS1Q9Y6Z4 181 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 HIVEP2P31629 2446 aa5.09□□□□□ -1.59
USP39-219ENST00000496047 SONP18583 2426 aaKnown RBP5.08□□□□□ -1.6
USP39-219ENST00000496047 A0A087WX48 190 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 F8VRH5 84 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 I3L3M4 83 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 CIDEAO60543 219 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 IGLV1-51P01701 117 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 NMUP48645 174 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 ODF1Q14990 250 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 C9orf66Q5T8R8 295 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 ERASQ7Z444 233 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 TMEM263Q8WUH6 116 aaKnown RBP5.08□□□□□ -1.6
USP39-219ENST00000496047 C16orf74Q96GX8 76 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 TIMM17AQ99595 171 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 MCRIP2Q9BUT9 160 aaKnown RBP5.08□□□□□ -1.6
USP39-219ENST00000496047 SNHG12Q9BXW3 62 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 TP53TG1Q9Y2A0 90 aa5.08□□□□□ -1.6
USP39-219ENST00000496047 CHTOPQ9Y3Y2 248 aaKnown RBP5.08□□□□□ -1.6
USP39-219ENST00000496047 TLN2Q9Y4G6 2542 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 IGHV3OR16-12A0A075B7B8 117 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 TRBV27A0A0K0K1C4 114 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 RBMY1BA6NDE4 496 aaKnown RBP5.07□□□□□ -1.6
USP39-219ENST00000496047 RBMY1EA6NEQ0 496 aaKnown RBP5.07□□□□□ -1.6
USP39-219ENST00000496047 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 SIVA1O15304 175 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 DLEU1O43261 78 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 GAS8-AS1O95177 125 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 RBMY1DP0C7P1 496 aaKnown RBP5.07□□□□□ -1.6
USP39-219ENST00000496047 POLR2KP53803 58 aaKnown RBP5.07□□□□□ -1.6
USP39-219ENST00000496047 MAJINQ3KP22 176 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 ZFP2Q6ZN57 461 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
USP39-219ENST00000496047 M0QY20 66 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 SPRY2O43597 315 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 CRYGDP07320 174 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 HINT1P49773 126 aaPredicted RBP5.06□□□□□ -1.6
USP39-219ENST00000496047 LINC00315P59091 139 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 SMR3AQ99954 134 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 JPT2Q9H910 190 aa5.06□□□□□ -1.6
USP39-219ENST00000496047 TRAV4A0A0B4J268 109 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 A0A1B0GV90 55 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 A6NDN8 102 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 RS1O15537 224 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 CRLF1O75462 422 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 NPSP0C0P6 89 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
USP39-219ENST00000496047 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 AZU1P20160 251 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 SEC11AP67812 179 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 HSD52Q0P140 79 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 PMVKQ15126 192 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
USP39-219ENST00000496047 RRN3P1Q2M238 152 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 BEAN1Q3B7T3 259 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms