RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TMEM218A2RU14 115 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 F8W036 122 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 PPP1R2P9O14990 202 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 C6orf223Q8N319 242 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
CCM2-217ENST00000492883 DNAH10OSP0CZ25 163 aa9.52□□□□□ -0.89
CCM2-217ENST00000492883 VPS13DQ5THJ4 4388 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 LINC00862A6NCI5 91 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 MT-ND4LP03901 98 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 LINC00336Q6ZUF6 198 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 DAZ4Q86SG3 579 aaKnown RBP9.51□□□□□ -0.89
CCM2-217ENST00000492883 ANAPC16Q96DE5 110 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
CCM2-217ENST00000492883 DAZ3Q9NR90 486 aaKnown RBP9.51□□□□□ -0.89
CCM2-217ENST00000492883 TRAV26-2A0A0B4J265 109 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 K7EP13 123 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 RTL8CO15255 209 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 GATD1Q8NB37 220 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 NACAE9PAV3 2078 aa9.5□□□□□ -0.89
CCM2-217ENST00000492883 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 ADCYAP1P18509 176 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 C10orf126Q8N4M7 172 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 SEC11CQ9BY50 192 aa9.49□□□□□ -0.89
CCM2-217ENST00000492883 TRBV6-8A0A0A6YYG3 113 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 A0A1B0GW15 77 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 BTF3P20290 206 aaKnown RBP9.48□□□□□ -0.89
CCM2-217ENST00000492883 CAMPP49913 170 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 MRPL54Q6P161 138 aaKnown RBP9.48□□□□□ -0.89
CCM2-217ENST00000492883 KCNIP4Q6PIL6 250 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 FRZBQ92765 325 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
CCM2-217ENST00000492883 TMEM262E9PQX1 116 aa9.47□□□□□ -0.89
CCM2-217ENST00000492883 RAB4AP20338 218 aa9.47□□□□□ -0.89
CCM2-217ENST00000492883 RNF185Q96GF1 192 aa9.47□□□□□ -0.89
CCM2-217ENST00000492883 S100A8P05109 93 aa9.46□□□□□ -0.9
CCM2-217ENST00000492883 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
CCM2-217ENST00000492883 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
CCM2-217ENST00000492883 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
CCM2-217ENST00000492883 KMT2AQ03164 3969 aa9.46□□□□□ -0.9
CCM2-217ENST00000492883 A0A087WX48 190 aa9.45□□□□□ -0.9
CCM2-217ENST00000492883 HBBP68871 147 aa9.45□□□□□ -0.9
CCM2-217ENST00000492883 NTM-AS1Q6ZSK4 140 aa9.45□□□□□ -0.9
CCM2-217ENST00000492883 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
CCM2-217ENST00000492883 NIT1Q86X76 327 aa9.45□□□□□ -0.9
CCM2-217ENST00000492883 TRBV25-1A0A075B6N4 114 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 IGHV1-24A0A0C4DH33 117 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 COTL1Q14019 142 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 Q8N3U1 123 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 DEFB104AQ8WTQ1 72 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 CTDSP1Q9GZU7 261 aa9.44□□□□□ -0.9
CCM2-217ENST00000492883 GAS8-AS1O95177 125 aa9.43□□□□□ -0.9
CCM2-217ENST00000492883 PKIAP61925 76 aa9.43□□□□□ -0.9
CCM2-217ENST00000492883 TNP2Q05952 138 aa9.43□□□□□ -0.9
CCM2-217ENST00000492883 ATP5L2Q7Z4Y8 100 aa9.43□□□□□ -0.9
CCM2-217ENST00000492883 ST20Q9HBF5 79 aa9.43□□□□□ -0.9
CCM2-217ENST00000492883 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 A0A1B0GXF2 115 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 PMCHP20382 165 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 GAGE6Q13070 117 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 ELOBQ15370 118 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 IQCJQ1A5X6 159 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
CCM2-217ENST00000492883 C10orf91Q5T1B1 145 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 BTF3L4Q96K17 158 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 CHCHD7Q9BUK0 85 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 Q9HAA7 133 aa9.42□□□□□ -0.9
CCM2-217ENST00000492883 NCR2O95944 276 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 PPP1R17O96001 155 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 CKS2P33552 79 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 RPS10P46783 165 aaKnown RBP9.41□□□□□ -0.9
CCM2-217ENST00000492883 AMTP48728 403 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 TMEM243Q9BU79 118 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
CCM2-217ENST00000492883 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
CCM2-217ENST00000492883 TRAV8-3A0A0A6YYJ7 113 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 I3L3M4 83 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 LAGE3Q14657 143 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 ATRAIDQ6UW56 229 aa9.4□□□□□ -0.9
CCM2-217ENST00000492883 Q6ZRN7 208 aaPredicted RBP9.4□□□□□ -0.9
CCM2-217ENST00000492883 UBE2L6O14933 153 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 PSCAO43653 123 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 S100PP25815 95 aa9.39□□□□□ -0.91
CCM2-217ENST00000492883 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms