RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 CSMD2Q7Z408 3487 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 CACNA1AO00555 2505 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 UBE2E2Q96LR5 201 aa11.87□□□□□ -0.51
SEMA4D-220ENST00000492386 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 J3QQQ9 107 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 IGHV3-30P01768 117 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 IGHV3-30-5P0DP03 117 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 I3L3M4 83 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
SEMA4D-220ENST00000492386 APOMO95445 188 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 MYO18BQ8IUG5 2567 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 TMEM223A0PJW6 202 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 FSHBP01225 129 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 TCTEX1D4Q5JR98 221 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 Q6YL49 198 aa11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 SPAG8Q99932 426 aaPredicted RBP11.85□□□□□ -0.51
SEMA4D-220ENST00000492386 UBE2D3P61077 147 aa11.84□□□□□ -0.51
SEMA4D-220ENST00000492386 UBE2D2P62837 147 aa11.84□□□□□ -0.51
SEMA4D-220ENST00000492386 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
SEMA4D-220ENST00000492386 MXRA5Q9NR99 2828 aa11.84□□□□□ -0.51
SEMA4D-220ENST00000492386 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
SEMA4D-220ENST00000492386 LGALS3P17931 250 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 TSSC4Q9Y5U2 329 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 FBN2P35556 2912 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 J3QR89 54 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 LEPROTO15243 131 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 CFC1BP0CG36 223 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 CFC1P0CG37 223 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 EDA2RQ9HAV5 297 aa11.83□□□□□ -0.52
SEMA4D-220ENST00000492386 POLQO75417 2590 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 C18orf65Q6ZTR6 163 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 A8MTW9 85 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 RHODO00212 210 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 INSL3P51460 131 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 SLURP1P55000 103 aa11.82□□□□□ -0.52
SEMA4D-220ENST00000492386 A0A0J9YXV3 536 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 DEFB136Q30KP8 78 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 BEX4Q9NWD9 120 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 IGHV3-73A0A0B4J1V6 119 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 RBMY1BA6NDE4 496 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 RBMY1EA6NEQ0 496 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 RBMY1DP0C7P1 496 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 HTN1P15515 57 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 PSMB2P49721 201 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 PROK1P58294 105 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 DEFB131AP59861 70 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 VCX2Q9H322 139 aa11.81□□□□□ -0.52
SEMA4D-220ENST00000492386 CR1P17927 2039 aa11.8□□□□□ -0.52
SEMA4D-220ENST00000492386 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
SEMA4D-220ENST00000492386 H3BMM0 161 aa11.79□□□□□ -0.52
SEMA4D-220ENST00000492386 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
SEMA4D-220ENST00000492386 SPATA25Q9BR10 227 aa11.79□□□□□ -0.52
SEMA4D-220ENST00000492386 PRM2P04554 102 aa11.79□□□□□ -0.52
SEMA4D-220ENST00000492386 IGHV4-31P0DP07 118 aa11.79□□□□□ -0.52
SEMA4D-220ENST00000492386 IGHV3-64A0A075B6Q5 118 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 AZU1P20160 251 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 Q5PR19 223 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 GTSF1LQ9H1H1 148 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 C1QTNF4Q9BXJ3 329 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 ACACBO00763 2458 aa11.78□□□□□ -0.52
SEMA4D-220ENST00000492386 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.52
SEMA4D-220ENST00000492386 CENPEQ02224 2701 aa11.77□□□□□ -0.52
SEMA4D-220ENST00000492386 LYRM7Q5U5X0 104 aa11.77□□□□□ -0.52
SEMA4D-220ENST00000492386 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.52
SEMA4D-220ENST00000492386 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.52
SEMA4D-220ENST00000492386 TCL1BO95988 128 aa11.77□□□□□ -0.53
SEMA4D-220ENST00000492386 Q9UF83 564 aa11.77□□□□□ -0.53
SEMA4D-220ENST00000492386 A4D1N5 150 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 Q6ZSN1 163 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 DUX3Q96PT4 197 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 M0R2P5 195 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 CD28P10747 220 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 FOXI1Q12951 378 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 Q8N2B8 174 aa11.76□□□□□ -0.53
SEMA4D-220ENST00000492386 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 A8MWV9 139 aa11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 CEMP1Q6PRD7 247 aaPredicted RBP11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 ZNF418Q8TF45 676 aaPredicted RBP11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 TNFRSF18Q9Y5U5 241 aa11.75□□□□□ -0.53
SEMA4D-220ENST00000492386 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 CRYBA4P53673 196 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 FAM208BQ5VWN6 2430 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 IGHV3-30-3P0DP02 117 aa11.74□□□□□ -0.53
SEMA4D-220ENST00000492386 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms