RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GAGE6Q13070 117 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 TMUB2Q71RG4 321 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 CIRBP-AS1Q8TBR5 109 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 TPPP3Q9BW30 176 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 GNG13Q9P2W3 67 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 URGCP-MRPS24S4R325 110 aa5.79□□□□□ -1.48
HDAC3-211ENST00000491581 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
HDAC3-211ENST00000491581 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 A0A087WWC5 75 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 A0A087WX48 190 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 TRBV6-8A0A0A6YYG3 113 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 F5H697 171 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 SNAI2O43623 268 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 ANGP03950 147 aaKnown RBP5.78□□□□□ -1.48
HDAC3-211ENST00000491581 MGPP08493 103 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 H2AFB1P0C5Y9 115 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 SEC11BP0C7V7 166 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
HDAC3-211ENST00000491581 CENPWQ5EE01 88 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 ATRAIDQ6UW56 229 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
HDAC3-211ENST00000491581 NKX6-2Q9C056 277 aaPredicted RBP5.78□□□□□ -1.48
HDAC3-211ENST00000491581 GFRA4Q9GZZ7 299 aa5.78□□□□□ -1.48
HDAC3-211ENST00000491581 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 USP17L23D6RBM5 183 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 PRSS1P07477 247 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 RAB5CP51148 216 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 RAB4BP61018 213 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 ZNF345Q14585 488 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 SPANXN1Q5VSR9 72 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 KRTAP26-1Q6PEX3 210 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 CHCHD5Q9BSY4 110 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 SSBP4Q9BWG4 385 aaPredicted RBP5.77□□□□□ -1.49
HDAC3-211ENST00000491581 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
HDAC3-211ENST00000491581 TRBV10-1A0A0K0K1A3 114 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 KANTRA0A1W2PQU2 76 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 HMSDA8MTL9 139 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 PFDN1O60925 122 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 IGLC6P0CF74 106 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 RBX1P62877 108 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
HDAC3-211ENST00000491581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
HDAC3-211ENST00000491581 IGLV4-60A0A075B6I1 120 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 OR5AL1P0C617 328 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 NKX2-5P52952 324 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-211ENST00000491581 FOXA3P55318 350 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-211ENST00000491581 OR2D3Q8NGH3 330 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 CHAC1Q9BUX1 264 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 C1orf43Q9BWL3 253 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 FAT3Q8TDW7 4589 aa5.75□□□□□ -1.49
HDAC3-211ENST00000491581 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 A0A0D9SG52 128 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 C19orf71A6NCJ1 209 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 UMAD1C9J7I0 102 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 M0QY20 66 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 SLPIP03973 132 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 TOR2AQ5JU69 321 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 LYZL1Q6UWQ5 148 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 C20orf203Q8NBC4 194 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 C11orf52Q96A22 123 aa5.74□□□□□ -1.49
HDAC3-211ENST00000491581 K7EN84 100 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 GAS8-AS1O95177 125 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 CRPP02741 224 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
HDAC3-211ENST00000491581 CXCL1P09341 107 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 CHTF8P0CG12 524 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 FER1L6-AS1Q8NA97 138 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 RMI2Q96E14 147 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 DAZAP1Q96EP5 407 aaKnown RBP5.73□□□□□ -1.49
HDAC3-211ENST00000491581 TCEAL7Q9BRU2 100 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 RNASE7Q9H1E1 156 aaKnown RBP5.73□□□□□ -1.49
HDAC3-211ENST00000491581 VAX2Q9UIW0 290 aa5.73□□□□□ -1.49
HDAC3-211ENST00000491581 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-211ENST00000491581 S100A9P06702 114 aaKnown RBP5.72□□□□□ -1.49
HDAC3-211ENST00000491581 ODF1Q14990 250 aa5.72□□□□□ -1.49
HDAC3-211ENST00000491581 KCNIP4Q6PIL6 250 aa5.72□□□□□ -1.49
HDAC3-211ENST00000491581 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
HDAC3-211ENST00000491581 AP1S3Q96PC3 154 aa5.72□□□□□ -1.49
HDAC3-211ENST00000491581 PRR34Q9NV39 138 aa5.72□□□□□ -1.49
HDAC3-211ENST00000491581 IGKV3OR2-268A0A0C4DH90 116 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 KRTAP29-1A8MX34 341 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-211ENST00000491581 SMIM17P0DL12 118 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 NTF3P20783 257 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 GNG4P50150 75 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 SULT1A2P50226 295 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 REG3AQ06141 175 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 Q0VG73 95 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 ELOBQ15370 118 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 NUDT10Q8NFP7 164 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 NUDT11Q96G61 164 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 CHCHD7Q9BUK0 85 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 MANBALQ9NQG1 85 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 MED9Q9NWA0 146 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 COX11Q9Y6N1 276 aa5.71□□□□□ -1.5
HDAC3-211ENST00000491581 hCG_2014768A0A024R1R8 64 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 TRBV25-1A0A075B6N4 114 aa5.7□□□□□ -1.5
HDAC3-211ENST00000491581 MEF2BQ02080 365 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-211ENST00000491581 IQCJQ1A5X6 159 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms