RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 ASB16-AS1Q495Z4 193 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 SPANXN2Q5MJ10 180 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 SGK494Q96LW2 274 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 NPCDR1Q9BY65 106 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 OTORQ9NRC9 128 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 PKIGQ9Y2B9 76 aa4.13□□□□□ -1.75
PDLIM1-203ENST00000490391 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 H3BVH4 76 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 S100A4P26447 101 aaKnown RBP4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 GNG5P63218 68 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 IAH1Q2TAA2 248 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 AP3S1Q92572 193 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 LINC00526Q96FQ7 95 aa4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 LYRM2Q9NU23 88 aaPredicted RBP4.12□□□□□ -1.75
PDLIM1-203ENST00000490391 IGLV7-46A0A075B6I9 117 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 TRBV25-1A0A075B6N4 114 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 TRBV6-1A0A0K0K1D8 114 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 C9orf170A2RU37 121 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 CTDSP2O14595 271 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 ARMS2P0C7Q2 107 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 CTF1Q16619 201 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 TMEM97Q5BJF2 176 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 DNLZQ5SXM8 178 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 OR11H4Q8NGC9 324 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 MCFD2Q8NI22 146 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 CMTM2Q8TAZ6 248 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 CARD19Q96LW7 228 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 NDFIP1Q9BT67 221 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 DERL1Q9BUN8 251 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
PDLIM1-203ENST00000490391 TRAV6A0A075B6T7 132 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 A0A087X002 238 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 B5MCH6 92 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 SULT1A1P50225 295 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 RAB4BP61018 213 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 IL18Q14116 193 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 SMUG1Q53HV7 270 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 OR5C1Q8NGR4 320 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 SLC25A21Q9BQT8 299 aaPredicted RBP4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 FUNDC2Q9BWH2 189 aa4.1□□□□□ -1.75
PDLIM1-203ENST00000490391 IGHV1-24A0A0C4DH33 117 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 IGSF23A1L1A6 192 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 EIF3GO75821 320 aaKnown RBP eCLIP4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 S100A11P31949 105 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 EIF5AP63241 154 aaKnown RBP4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 GAGE2BQ13066 116 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 AQP10Q96PS8 301 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 VCX3BQ9H321 246 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 GSKIPQ9P0R6 139 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 MBD2Q9UBB5 411 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 PSG8Q9UQ74 426 aa4.09□□□□□ -1.75
PDLIM1-203ENST00000490391 A0A087WZ39 114 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 KRBOX1C9JBD0 128 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 L7N2F9 121 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 M0R381 172 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 RGS5O15539 181 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 TCRAP04437 139 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 SULT1A2P50226 295 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 BCAP31P51572 246 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 VAMP2P63027 116 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 FOXI1Q12951 378 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 ZNF674Q2M3X9 581 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 FAM74A1Q5RGS3 127 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 TMEM252Q8N6L7 170 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 THAP6Q8TBB0 222 aa4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 CHCHD10Q8WYQ3 142 aaPredicted RBP4.08□□□□□ -1.76
PDLIM1-203ENST00000490391 SERTM2A0A1B0GWG4 89 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 GRIFINA4D1Z8 144 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 B4DEV8 164 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 BCL2P10415 239 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 HBG1P69891 147 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 HBG2P69892 147 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 FLI1Q01543 452 aaPredicted RBP4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 SPCS2Q15005 226 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 ZNF56Q15929 161 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 ATP6V1FQ16864 119 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 ZFP69Q49AA0 526 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 KHDC3LQ587J8 217 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 ZFP82Q8N141 532 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 NAA50Q9GZZ1 169 aaKnown RBP4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 PPDPFQ9H3Y8 114 aa4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 LSM5Q9Y4Y9 91 aaKnown RBP4.07□□□□□ -1.76
PDLIM1-203ENST00000490391 FGF6P10767 208 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 FAUP35544 74 aaKnown RBP4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 CRIP1P50238 77 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 PRNTQ86SH4 94 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 STX12Q86Y82 276 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 C5orf17Q8NAS9 161 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 SDHCQ99643 169 aaPredicted RBP4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 TMEM243Q9BU79 118 aa4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 RSL24D1Q9UHA3 163 aaKnown RBP4.06□□□□□ -1.76
PDLIM1-203ENST00000490391 NEBP20929 6669 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms