RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 MGPP08493 103 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 IGLC6P0CF74 106 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 PKIAP61925 76 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 ALKAL2Q6UX46 152 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 Q8N1X5 172 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 Q8N814 137 aa11.65□□□□□ -0.54
SEC13-218ENST00000490283 TRBV20OR9-2A0A075B6H5 130 aa11.64□□□□□ -0.55
SEC13-218ENST00000490283 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
SEC13-218ENST00000490283 KLK12Q9UKR0 248 aa11.64□□□□□ -0.55
SEC13-218ENST00000490283 PCLOQ9Y6V0 5065 aa11.64□□□□□ -0.55
SEC13-218ENST00000490283 TRGC1P0CF51 173 aa11.63□□□□□ -0.55
SEC13-218ENST00000490283 HSPG2P98160 4391 aa11.63□□□□□ -0.55
SEC13-218ENST00000490283 IGKV2D-24A0A075B6R9 120 aa11.62□□□□□ -0.55
SEC13-218ENST00000490283 KRTAP10-1P60331 282 aa11.62□□□□□ -0.55
SEC13-218ENST00000490283 UBE2WQ96B02 151 aa11.62□□□□□ -0.55
SEC13-218ENST00000490283 CHCHD5Q9BSY4 110 aa11.62□□□□□ -0.55
SEC13-218ENST00000490283 KIF25-AS1Q9Y6Z4 181 aa11.62□□□□□ -0.55
SEC13-218ENST00000490283 TMEM250H0YL14 139 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 CRPP02741 224 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 Q0VG73 95 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 NUDT10Q8NFP7 164 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 NUDT11Q96G61 164 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 DNAJC30Q96LL9 226 aa11.61□□□□□ -0.55
SEC13-218ENST00000490283 KRTAP4-5Q9BYR2 181 aa11.6□□□□□ -0.55
SEC13-218ENST00000490283 RPP21Q9H633 154 aaKnown RBP11.6□□□□□ -0.55
SEC13-218ENST00000490283 DPH3P1Q9H4G8 78 aa11.59□□□□□ -0.55
SEC13-218ENST00000490283 TRBV25-1A0A075B6N4 114 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 LECT2O14960 151 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 NTF3P20783 257 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 CEBPGP53567 150 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 SUMO4Q6EEV6 95 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 WDR73Q6P4I2 378 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 OCC1Q8TAD7 63 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
SEC13-218ENST00000490283 DNAH5Q8TE73 4624 aa11.58□□□□□ -0.56
SEC13-218ENST00000490283 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 M0QY20 66 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 ANGP03950 147 aaKnown RBP11.57□□□□□ -0.56
SEC13-218ENST00000490283 CTRLP40313 264 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 TWIST1Q15672 202 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 SMIM15Q7Z3B0 74 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 C15orf54Q8N8G6 183 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 BAALCQ8WXS3 180 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 C1orf43Q9BWL3 253 aa11.57□□□□□ -0.56
SEC13-218ENST00000490283 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
SEC13-218ENST00000490283 K7EN84 100 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SEC13-218ENST00000490283 XGP55808 180 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 Q8N976 141 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 TMEM70Q9BUB7 260 aa11.56□□□□□ -0.56
SEC13-218ENST00000490283 IGHV1-24A0A0C4DH33 117 aa11.55□□□□□ -0.56
SEC13-218ENST00000490283 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
SEC13-218ENST00000490283 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SEC13-218ENST00000490283 FRZBQ92765 325 aa11.55□□□□□ -0.56
SEC13-218ENST00000490283 APOBP04114 4563 aaKnown RBP11.55□□□□□ -0.56
SEC13-218ENST00000490283 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
SEC13-218ENST00000490283 ATRAIDQ6UW56 229 aa11.54□□□□□ -0.56
SEC13-218ENST00000490283 CNFNQ9BYD5 112 aa11.54□□□□□ -0.56
SEC13-218ENST00000490283 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
SEC13-218ENST00000490283 GAGE6Q13070 117 aa11.53□□□□□ -0.56
SEC13-218ENST00000490283 IQCJQ1A5X6 159 aa11.53□□□□□ -0.56
SEC13-218ENST00000490283 C14orf177Q52M58 125 aa11.53□□□□□ -0.56
SEC13-218ENST00000490283 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
SEC13-218ENST00000490283 SMIM7Q9BQ49 75 aa11.53□□□□□ -0.56
SEC13-218ENST00000490283 A8MWL6 223 aa11.52□□□□□ -0.57
SEC13-218ENST00000490283 MIAQ16674 131 aa11.52□□□□□ -0.57
SEC13-218ENST00000490283 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.57
SEC13-218ENST00000490283 BORCS7Q96B45 105 aa11.52□□□□□ -0.57
SEC13-218ENST00000490283 NDUFS6O75380 124 aaKnown RBP11.51□□□□□ -0.57
SEC13-218ENST00000490283 RBX1P62877 108 aa11.51□□□□□ -0.57
SEC13-218ENST00000490283 ENHOQ6UWT2 76 aa11.51□□□□□ -0.57
SEC13-218ENST00000490283 FAM210AQ96ND0 272 aa11.51□□□□□ -0.57
SEC13-218ENST00000490283 TMEM243Q9BU79 118 aa11.51□□□□□ -0.57
SEC13-218ENST00000490283 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 UBE2L6O14933 153 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 COTL1Q14019 142 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 CT83Q5H943 113 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 ABCA13Q86UQ4 5058 aa11.5□□□□□ -0.57
SEC13-218ENST00000490283 ZNF727A8MUV8 499 aa11.49□□□□□ -0.57
SEC13-218ENST00000490283 Q5VSD8 79 aa11.49□□□□□ -0.57
SEC13-218ENST00000490283 TEX261Q6UWH6 196 aa11.49□□□□□ -0.57
SEC13-218ENST00000490283 GTSF1Q8WW33 167 aa11.49□□□□□ -0.57
SEC13-218ENST00000490283 FAM229AH3BQW9 127 aa11.48□□□□□ -0.57
SEC13-218ENST00000490283 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
SEC13-218ENST00000490283 AMTP48728 403 aa11.48□□□□□ -0.57
SEC13-218ENST00000490283 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
SEC13-218ENST00000490283 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
SEC13-218ENST00000490283 SMR3BP02814 79 aaPredicted RBP11.47□□□□□ -0.57
SEC13-218ENST00000490283 HAMPP81172 84 aa11.47□□□□□ -0.57
SEC13-218ENST00000490283 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
SEC13-218ENST00000490283 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
SEC13-218ENST00000490283 GATD1Q8NB37 220 aa11.47□□□□□ -0.57
SEC13-218ENST00000490283 PRR34Q9NV39 138 aa11.47□□□□□ -0.57
SEC13-218ENST00000490283 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms