RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 DCHS2Q6V1P9 2916 aa-0.17□□□□□ -2.44
CD46-216ENST00000490278 BSNQ9UPA5 3926 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 ARHGEF10O15013 1369 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 DOCK11Q5JSL3 2073 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 ARPC5O15511 151 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 NCR2O95944 276 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 LZICQ8WZA0 190 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 BATF3Q9NR55 127 aa-0.18□□□□□ -2.44
CD46-216ENST00000490278 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.18□□□□□ -2.44
CD46-216ENST00000490278 AKAP6Q13023 2319 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 MUC22E2RYF6 1773 aaPredicted RBP-0.19□□□□□ -2.44
CD46-216ENST00000490278 TENM4Q6N022 2769 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 A6NIN4 97 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 M0R2Z0 102 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 CFDP00746 253 aaPredicted RBP-0.19□□□□□ -2.44
CD46-216ENST00000490278 UBE2D1P51668 147 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 C10orf82Q8WW14 230 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 PSMG3Q9BT73 122 aaPredicted RBP-0.19□□□□□ -2.44
CD46-216ENST00000490278 MAP1BP46821 2468 aaKnown RBP-0.19□□□□□ -2.44
CD46-216ENST00000490278 MUC12Q9UKN1 5478 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 LAMB1P07942 1786 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 FAT2Q9NYQ8 4349 aa-0.19□□□□□ -2.44
CD46-216ENST00000490278 IBTKQ9P2D0 1353 aaPredicted RBP-0.19□□□□□ -2.44
CD46-216ENST00000490278 PRG4Q92954 1404 aaPredicted RBP-0.2□□□□□ -2.44
CD46-216ENST00000490278 LPAP08519 4548 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 PITX3O75364 302 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 IFNA17P01571 189 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 Q6ZUT4 128 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 UBE2DNLQ8IWF7 75 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 ZNF292O60281 2723 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 ALMS1Q8TCU4 4167 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 ADGRB1O14514 1584 aa-0.2□□□□□ -2.44
CD46-216ENST00000490278 FLNAP21333 2647 aaKnown RBP-0.2□□□□□ -2.44
CD46-216ENST00000490278 APC2O95996 2303 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 UBE2G1P62253 170 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
CD46-216ENST00000490278 PTPN13Q12923 2485 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 TMEM2Q9UHN6 1383 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 TNXBP22105 4242 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 SPTBN2O15020 2390 aa-0.21□□□□□ -2.44
CD46-216ENST00000490278 GOLGA3Q08378 1498 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 PARP14Q460N5 1801 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 ZANQ9Y493 2812 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 C10orf142B7Z368 130 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 K7ERU9 68 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 IL5P05113 134 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 PIPP12273 146 aaPredicted RBP-0.22□□□□□ -2.44
CD46-216ENST00000490278 WFDC6Q9BQY6 131 aa-0.22□□□□□ -2.44
CD46-216ENST00000490278 DAPK1P53355 1430 aa-0.22□□□□□ -2.45
CD46-216ENST00000490278 PIEZO2Q9H5I5 2752 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 TRAV1-2A0A0B4J238 106 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 CLPSL1A2RUU4 121 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 RRAS2P62070 204 aaPredicted RBP-0.23□□□□□ -2.45
CD46-216ENST00000490278 SCIMPQ6UWF3 145 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 SSBP3-AS1Q7Z2R9 100 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 PKD1L1Q8TDX9 2849 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 MYCBP2O75592 4640 aa-0.23□□□□□ -2.45
CD46-216ENST00000490278 CHD6Q8TD26 2715 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 TENM2Q9NT68 2774 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 SRRM2Q9UQ35 2752 aaKnown RBP-0.24□□□□□ -2.45
CD46-216ENST00000490278 ZNF815PA8K554 130 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 G3V318 75 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 APOC4-APOC2K7ER74 178 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 NPFFO15130 113 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 PKDREJQ9NTG1 2253 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 DOPEY2Q9Y3R5 2298 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 FHAD1B1AJZ9 1412 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 ARFGEF1Q9Y6D6 1849 aa-0.24□□□□□ -2.45
CD46-216ENST00000490278 TRBV10-3A0A0K0K1G6 114 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 CBLN1P23435 193 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 ZNF818PQ6ZRF7 136 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 TSTD1Q8NFU3 115 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 SPTSSAQ969W0 71 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 COPZ2Q9P299 210 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 SIPA1L3O60292 1781 aaPredicted RBP-0.25□□□□□ -2.45
CD46-216ENST00000490278 PLCE1Q9P212 2302 aa-0.25□□□□□ -2.45
CD46-216ENST00000490278 MYH6P13533 1939 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 Q5VV11 94 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 SPTSSBQ8NFR3 76 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 CYP4F30PQ9H0H9 118 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 SPTBN1Q01082 2364 aaKnown RBP-0.26□□□□□ -2.45
CD46-216ENST00000490278 WNK1Q9H4A3 2382 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 LRP1BQ9NZR2 4599 aa-0.26□□□□□ -2.45
CD46-216ENST00000490278 COL6A3P12111 3177 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
CD46-216ENST00000490278 KMT2CQ8NEZ4 4911 aaKnown RBP-0.27□□□□□ -2.45
CD46-216ENST00000490278 ZMYM4Q5VZL5 1548 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 C2CD3Q4AC94 2353 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 A0A0D9SFI3 127 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 FAM92AA1XBS5 289 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 SNCGO76070 127 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 NDUFB6O95139 128 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 SMIM6P0DI80 62 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 GUCA1AP43080 201 aaPredicted RBP-0.27□□□□□ -2.45
CD46-216ENST00000490278 ANP32BQ92688 251 aaKnown RBP-0.27□□□□□ -2.45
CD46-216ENST00000490278 ACANP16112 2415 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 CEP152O94986 1710 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 CSPG4Q6UVK1 2322 aa-0.27□□□□□ -2.45
CD46-216ENST00000490278 MYH9P35579 1960 aaKnown RBP-0.28□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms