RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 ASAH2BP0C7U1 165 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 LGALSLQ3ZCW2 172 aaPredicted RBP1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 FAM27BQ5VT28 67 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 ARPINQ7Z6K5 226 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 SNX29P2Q8IUI4 249 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 Q8IYB0 196 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF563Q8TA94 476 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 VCXQ9H320 206 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 XAGE1AQ9HD64 81 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 SPANXCQ9NY87 97 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 FKBP11Q9NYL4 201 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 ABCA2Q9BZC7 2435 aa1.83□□□□□ -2.12
DEPDC1-204ENST00000489862 SONP18583 2426 aaKnown RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 ARFGEF3Q5TH69 2177 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 TRAV27A0A087WT01 109 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 TCRBV3S1A0A5B6 114 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF670-ZNF695F2Z2N8 137 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 GGCTO75223 188 aaKnown RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 IL4P05112 153 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 ZNF14P17017 642 aaPredicted RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 CRYGSP22914 178 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 AKR1D1P51857 326 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 AQP4P55087 323 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 YPEL3P61236 119 aaPredicted RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 MOBPQ13875 183 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 HES1Q14469 280 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 LINC00311Q8N616 119 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 OR8B2Q96RD0 313 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 MND1Q9BWT6 205 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 BANF2Q9H503 90 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 GNG8Q9UK08 70 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 AP4S1Q9Y587 144 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 FN1P02751 2386 aaKnown RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 ANK2Q01484 3957 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 HEATR1Q9H583 2144 aaKnown RBP1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 MALRD1Q5VYJ5 2156 aa1.82□□□□□ -2.12
DEPDC1-204ENST00000489862 TENM1Q9UKZ4 2725 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 TRAV7A0A075B6U4 112 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 TRAV3A0A0B4J244 114 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 RPL36A-HNRNPH2H7BZ11 118 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 MT-ND6P03923 174 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 RPL35P42766 123 aaKnown RBP1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 COPZ1P61923 177 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 AKR1C1Q04828 323 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 SPRNQ5BIV9 151 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 IZUMO2Q6UXV1 221 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 AAED1Q7RTV5 226 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 POP5Q969H6 163 aaKnown RBP1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 Q96M85 177 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 GINS4Q9BRT9 223 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 HSPE1-MOB4S4R3N1 261 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 JMJD1CQ15652 2540 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 TRRAPQ9Y4A5 3859 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 NAV3Q8IVL0 2385 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 ATRQ13535 2644 aa1.81□□□□□ -2.12
DEPDC1-204ENST00000489862 IGHV1-18A0A0C4DH31 117 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 TRBV27A0A0K0K1C4 114 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 MEIS3P1A6NDR6 274 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 E7EQL1 145 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 H3BPC8 53 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 RER1O15258 196 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 GNRH2O43555 120 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 PITX3O75364 302 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 MRPL33O75394 65 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 COX6B1P14854 86 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 COL8A2P25067 703 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 HIST1H4AP62805 103 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 KHDC3LQ587J8 217 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 NCMAPQ5T1S8 102 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 LINC01590Q5TEZ4 76 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 Q6ZQT0 140 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 RNF182Q8N6D2 247 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 DIRC1Q969H9 104 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 TMEM106AQ96A25 262 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 AMELYQ99218 206 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 IER3IP1Q9Y5U9 82 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 ABCA1O95477 2261 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 CHD3Q12873 2000 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 A0A096LNT2 108 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 GRIFINA4D1Z8 144 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 F6UZH7 168 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 CCDC179H3BU77 68 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 HIST1H2BKO60814 126 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 IGLV1-51P01701 117 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 HIST1H2BJP06899 126 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 GPX1P07203 203 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 CTSDP07339 412 aaPredicted RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 CD14P08571 375 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 CD24P25063 80 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 RPS27P42677 84 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 SNRPD3P62318 126 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 HSD17B12Q53GQ0 312 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 C10orf128Q5T292 105 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 EIF5AL1Q6IS14 154 aaKnown RBP1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 DYNAPQ8N1N2 210 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 OR5H6Q8NGV6 325 aa1.8□□□□□ -2.12
DEPDC1-204ENST00000489862 PRELID3AQ96N28 172 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms