RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 NUDT3O95989 172 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 PLNP26678 52 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 SSTP61278 116 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 RHOHQ15669 191 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 NSUN5P1Q3KNT7 163 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF876PQ49A33 203 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 SPATA45Q537H7 98 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 Q6ZN92 141 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 C18orf65Q6ZTR6 163 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 NRACQ8N912 160 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 TMEM141Q96I45 108 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 SPATA25Q9BR10 227 aa4.68□□□□□ -1.66
SF3A3-208ENST00000489537 TRAV12-1A0A0B4J245 112 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 M0R143 59 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 IGKV3-20P01619 116 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 PRSS1P07477 247 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 CRYBA4P53673 196 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 ZNF56Q15929 161 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 ODF3L2Q3SX64 289 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 TMEM263Q8WUH6 116 aaKnown RBP4.67□□□□□ -1.66
SF3A3-208ENST00000489537 RASL10AQ92737 203 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 C16orf74Q96GX8 76 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 CYSLTR1Q9Y271 337 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 PAM16Q9Y3D7 125 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 MGAM2Q2M2H8 2515 aa4.67□□□□□ -1.66
SF3A3-208ENST00000489537 IGLV2-18A0A075B6J9 118 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 TRBV10-1A0A0K0K1A3 114 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 I3L3M4 83 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 NCR2O95944 276 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
SF3A3-208ENST00000489537 EDN2P20800 178 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 DAZ2Q13117 558 aaKnown RBP4.66□□□□□ -1.66
SF3A3-208ENST00000489537 SLC25A34Q6PIV7 304 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 ERASQ7Z444 233 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 LINC00482Q8N8I6 264 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 C11orf44Q8N8P7 122 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 TOMM6Q96B49 74 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 SCGB3A1Q96QR1 104 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 TIMM17AQ99595 171 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 MRPS16Q9Y3D3 137 aaKnown RBP4.66□□□□□ -1.66
SF3A3-208ENST00000489537 TNFRSF18Q9Y5U5 241 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 KIF25-AS1Q9Y6Z4 181 aa4.66□□□□□ -1.66
SF3A3-208ENST00000489537 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 M0QY20 66 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 SIVA1O15304 175 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 DLEU1O43261 78 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 DPM2O94777 84 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 CRYGDP07320 174 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 HNRNPA3P51991 378 aaKnown RBP4.65□□□□□ -1.67
SF3A3-208ENST00000489537 POLR2KP53803 58 aaKnown RBP4.65□□□□□ -1.67
SF3A3-208ENST00000489537 APOC4P55056 127 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 RRN3P1Q2M238 152 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 TMEM97Q5BJF2 176 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 FAM74A4Q5TZK3 123 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 SUMO4Q6EEV6 95 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 C12orf54Q6X4T0 127 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 BOD1L2Q8IYS8 172 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 KIR2DL5BQ8NHK3 375 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 CITED1Q99966 193 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 CSTL1Q9H114 145 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 PRO1933Q9H354 126 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 MDFICQ9P1T7 246 aa4.65□□□□□ -1.67
SF3A3-208ENST00000489537 VWFP04275 2813 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 LINC00587B1AMM8 73 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 RS1O15537 224 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 IGHV3-53P01767 116 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 IGKCP01834 107 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 IGLC3P0DOY3 106 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 PRB4P10163 310 aaPredicted RBP4.64□□□□□ -1.67
SF3A3-208ENST00000489537 LINC00315P59091 139 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 DEFB1P60022 68 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 HERVK_113P61574 105 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 C2orf66Q6UXQ4 117 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 Q8N976 141 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 WFDC9Q8NEX5 89 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
SF3A3-208ENST00000489537 A0A087WWL8 130 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 A0A087WX48 190 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 A0A096LNJ9 63 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 TEX48A0A1B0GUV7 120 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 F8VRH5 84 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 HTN1P15515 57 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 RPL36AP83881 106 aaKnown RBP4.63□□□□□ -1.67
SF3A3-208ENST00000489537 C11orf72Q8NBR9 251 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 OR4C5Q8NGB2 326 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 RPL36ALQ969Q0 106 aaKnown RBP4.63□□□□□ -1.67
SF3A3-208ENST00000489537 C2orf88Q9BSF0 95 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 XCL2Q9UBD3 114 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 PLA2G2DQ9UNK4 145 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 PYGO1Q9Y3Y4 419 aa4.63□□□□□ -1.67
SF3A3-208ENST00000489537 WNK1Q9H4A3 2382 aa4.62□□□□□ -1.67
SF3A3-208ENST00000489537 RBMY1BA6NDE4 496 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 RBMY1EA6NEQ0 496 aaKnown RBP4.62□□□□□ -1.67
SF3A3-208ENST00000489537 H0Y8G0 127 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms