RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 RIF1Q5UIP0 2472 aaKnown RBP2.07□□□□□ -2.08
CALD1-221ENST00000489019 TRAV12-2A0A075B6T6 113 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 A0A0J9YX75 114 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 K7EQG2 157 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 CRXO43186 299 aaPredicted RBP2.07□□□□□ -2.08
CALD1-221ENST00000489019 NXPH4O95158 308 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 PPP1R17O96001 155 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 IGKCP01834 107 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 HTN1P15515 57 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 G0S2P27469 103 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 NMUP48645 174 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 DEFB131AP59861 70 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 ZNF56Q15929 161 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 DEFB136Q30KP8 78 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 ORMDL2Q53FV1 153 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 TMEM97Q5BJF2 176 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 FAM74A4Q5TZK3 123 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 FOXI2Q6ZQN5 318 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 Q8N377 158 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 TMEM86BQ8N661 226 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 C14orf178Q8N769 122 aaPredicted RBP2.07□□□□□ -2.08
CALD1-221ENST00000489019 Q8NBF4 154 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 WFDC11Q8NEX6 87 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 C11orf45Q8TAV5 145 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 DCANP1Q8TF63 244 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 C4orf3Q8WVX3 66 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 TMEM158Q8WZ71 300 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 FAM19A4Q96LR4 140 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 SCGB3A1Q96QR1 104 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 FOXC2Q99958 501 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 CNFNQ9BYD5 112 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 MRPS16Q9Y3D3 137 aaKnown RBP2.07□□□□□ -2.08
CALD1-221ENST00000489019 ZNF292O60281 2723 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 NAV3Q8IVL0 2385 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 MGAQ8IWI9 3026 aa2.07□□□□□ -2.08
CALD1-221ENST00000489019 COL6A6A6NMZ7 2263 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 ROS1P08922 2347 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 IGHV1OR15-1A0A075B7D0 117 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 A0A096LNJ9 63 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 IGHV3-38A0A0C4DH36 116 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 KNCNA6PVL3 124 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 KLLNB2CW77 178 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
CALD1-221ENST00000489019 CD5LO43866 347 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 COX8AP10176 69 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 RNASE3P12724 160 aaKnown RBP2.06□□□□□ -2.08
CALD1-221ENST00000489019 NDUFV3P56181 108 aaKnown RBP2.06□□□□□ -2.08
CALD1-221ENST00000489019 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 C12orf54Q6X4T0 127 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 APRG1Q8IVJ8 170 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 Q8N2B8 174 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 LINC00469Q8N7U9 141 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 OR4C5Q8NGB2 326 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 OR9G4Q8NGQ1 327 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
CALD1-221ENST00000489019 RPL39LQ96EH5 51 aaKnown RBP2.06□□□□□ -2.08
CALD1-221ENST00000489019 ODF3Q96PU9 254 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 KIR2DL4Q99706 377 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 C20orf78Q9BR46 151 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 SMIM2Q9BVW6 85 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 ASPMQ8IZT6 3477 aa2.06□□□□□ -2.08
CALD1-221ENST00000489019 CFAP47Q6ZTR5 3102 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 IGLV2-18A0A075B6J9 118 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 IGHV3OR16-12A0A075B7B8 117 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 A0A087WX48 190 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 TRAV2A0A0B4J234 112 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 IGHV3-16A0A0C4DH30 117 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 A6NDN8 102 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 LINC01546A6NGU7 62 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 LINC01549A6NIU2 74 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 H7C1H1 209 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 K7EMI3 77 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 DLEU1O43261 78 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 DPM2O94777 84 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 CD28P10747 220 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 PLNP26678 52 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 CMC4P56277 68 aaPredicted RBP2.05□□□□□ -2.08
CALD1-221ENST00000489019 MPV17L2Q567V2 206 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 REG3GQ6UW15 175 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 C2orf66Q6UXQ4 117 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 NEGR1Q7Z3B1 354 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 TMEM61Q8N0U2 210 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 DEFB104AQ8WTQ1 72 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 RASL10AQ92737 203 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 TOMM6Q96B49 74 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 C9orf85Q96MD7 179 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 LINC01587Q99440 93 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 TMEM208Q9BTX3 173 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 JPT2Q9H910 190 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 TP73-AS1Q9UF72 201 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 CYSLTR1Q9Y271 337 aa2.05□□□□□ -2.08
CALD1-221ENST00000489019 ZNF256Q9Y2P7 627 aaPredicted RBP2.05□□□□□ -2.08
CALD1-221ENST00000489019 TSSC4Q9Y5U2 329 aaPredicted RBP2.05□□□□□ -2.08
CALD1-221ENST00000489019 IGHV3-73A0A0B4J1V6 119 aa2.04□□□□□ -2.08
CALD1-221ENST00000489019 TRAV12-1A0A0B4J245 112 aa2.04□□□□□ -2.08
CALD1-221ENST00000489019 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
CALD1-221ENST00000489019 SDHAF1A6NFY7 115 aa2.04□□□□□ -2.08
CALD1-221ENST00000489019 OR11H12B2RN74 326 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms