RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 EIF4EBP3O60516 100 aaPredicted RBP10.66□□□□□ -0.7
RER1-207ENST00000488353 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 C16orf92Q96LL3 132 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 CENPEQ02224 2701 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 DEFB1P60022 68 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 Q1RN00 199 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 BRD3OSQ6XYD6 125 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 NRGNQ92686 78 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
RER1-207ENST00000488353 IGHV4OR15-8A0A075B7B6 117 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 A0A087WW49 117 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 H3BMM0 161 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 POM121L12Q8N7R1 296 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 TRBV7-1A0A0A6YYK4 115 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.7
RER1-207ENST00000488353 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
RER1-207ENST00000488353 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 LGALS9O00182 355 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
RER1-207ENST00000488353 ATP5J2P56134 94 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
RER1-207ENST00000488353 MEIG1Q5JSS6 88 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 C20orf173Q96LM9 149 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 PIMREGQ9BSJ6 248 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 POLQO75417 2590 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 VCYO14598 125 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 ELANEP08246 267 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
RER1-207ENST00000488353 IGHV4-30-2A0A087WSY4 118 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 LEPROTO15243 131 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 C9orf139Q6ZV77 190 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 BBC3Q96PG8 261 aaPredicted RBP10.63□□□□□ -0.71
RER1-207ENST00000488353 TRBV12-3P01733 135 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 C10orf105Q8TEF2 133 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 U3KQE9 123 aa10.63□□□□□ -0.71
RER1-207ENST00000488353 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.714e-8■■■■■ 35.4
RER1-207ENST00000488353 C2orf82Q6UX34 121 aa10.62□□□□□ -0.71
RER1-207ENST00000488353 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
RER1-207ENST00000488353 LINC00315P59091 139 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
RER1-207ENST00000488353 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 M0R2P5 195 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 GNRH2O43555 120 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 IGHV4-38-2P0DP08 117 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 RPL11P62913 178 aaKnown RBP10.61□□□□□ -0.71
RER1-207ENST00000488353 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
RER1-207ENST00000488353 FAM240AA0A1B0GVK7 77 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 OVOL1O14753 267 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 IGHV3-11P01762 117 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 LY6EQ16553 131 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 USP9YO00507 2555 aaPredicted RBP10.6□□□□□ -0.71
RER1-207ENST00000488353 A0A0J9YX75 114 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 TRIAP1O43715 76 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 CSPG4Q6UVK1 2322 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 MUC4Q99102 2169 aa10.6□□□□□ -0.71
RER1-207ENST00000488353 FBN2P35556 2912 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 H3BT86 120 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 NXPH4O95158 308 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
RER1-207ENST00000488353 MOB4Q9Y3A3 225 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 F6UB75 175 aa10.59□□□□□ -0.71
RER1-207ENST00000488353 H7C423 109 aa10.58□□□□□ -0.72
RER1-207ENST00000488353 SUMO4Q6EEV6 95 aa10.58□□□□□ -0.72
RER1-207ENST00000488353 COX6CP09669 75 aa10.58□□□□□ -0.72
RER1-207ENST00000488353 ZNF56Q15929 161 aa10.58□□□□□ -0.72
RER1-207ENST00000488353 F5H697 171 aa10.57□□□□□ -0.72
RER1-207ENST00000488353 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
RER1-207ENST00000488353 ZANQ9Y493 2812 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
RER1-207ENST00000488353 A0A0J9YXY3 114 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 FAM223BA6NKX1 122 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 FAM223AQ8IWN6 122 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 FAM19A4Q96LR4 140 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 ICOSQ9Y6W8 199 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 IGHV3-64A0A075B6Q5 118 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
RER1-207ENST00000488353 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 DEFB121Q5J5C9 76 aa10.56□□□□□ -0.72
RER1-207ENST00000488353 PTPN13Q12923 2485 aa10.55□□□□□ -0.72
RER1-207ENST00000488353 BRI3O95415 125 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms