RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 C15orf53Q8NAA6 179 aa9.13□□□□□ -0.95
NR1H3-223ENST00000486991 HHLA3Q9XRX5 114 aa9.13□□□□□ -0.95
NR1H3-223ENST00000486991 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
NR1H3-223ENST00000486991 SLAQ13239 276 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 RASL11AQ6T310 242 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 AMN1Q8IY45 258 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 YPEL4Q96NS1 127 aa9.12□□□□□ -0.95
NR1H3-223ENST00000486991 A0A0J9YY99 117 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 FAM104BQ5XKR9 115 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 TMEM136Q6ZRR5 245 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 LINC00336Q6ZUF6 198 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 PRO0255Q9UI72 69 aa9.11□□□□□ -0.95
NR1H3-223ENST00000486991 TRAV26-1A0A087WT03 109 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 TRAV26-2A0A0B4J265 109 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 K7EQD1 137 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 PAX4O43316 350 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 RAB4AP20338 218 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 CRYBA4P53673 196 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 COX19Q49B96 90 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 RNF185Q96GF1 192 aa9.1□□□□□ -0.95
NR1H3-223ENST00000486991 IGLV2-18A0A075B6J9 118 aa9.09□□□□□ -0.95
NR1H3-223ENST00000486991 TRBV6-4A0A1B0GX49 114 aa9.09□□□□□ -0.95
NR1H3-223ENST00000486991 RHOHQ15669 191 aa9.09□□□□□ -0.95
NR1H3-223ENST00000486991 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
NR1H3-223ENST00000486991 PRADC1Q9BSG0 188 aa9.09□□□□□ -0.95
NR1H3-223ENST00000486991 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
NR1H3-223ENST00000486991 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 SMKR1H3BMG3 65 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 H7C1H1 209 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 NCR2O95944 276 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 GYPEP15421 78 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 FRZBQ92765 325 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
NR1H3-223ENST00000486991 COLCA2A8K830 154 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 M0QY20 66 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 APCSP02743 223 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 MT-ND6P03923 174 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 CKS2P33552 79 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 MRAP2Q96G30 205 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
NR1H3-223ENST00000486991 TRAPPC1Q9Y5R8 145 aa9.07□□□□□ -0.96
NR1H3-223ENST00000486991 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 D6R8Y8 96 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 NUDT3O95989 172 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 FABP9Q0Z7S8 132 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 GAGE1Q13065 139 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 GAGE4Q13068 117 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 GAGE5Q13069 117 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
NR1H3-223ENST00000486991 Q9UF83 564 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 HSPG2P98160 4391 aa9.06□□□□□ -0.96
NR1H3-223ENST00000486991 TRBV10-1A0A0K0K1A3 114 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 RPS10P46783 165 aaKnown RBP9.05□□□□□ -0.96
NR1H3-223ENST00000486991 CCL18P55774 89 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 RPL36AP83881 106 aaKnown RBP9.05□□□□□ -0.96
NR1H3-223ENST00000486991 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 OR10J3Q5JRS4 329 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 NEXN-AS1Q8NBZ9 246 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 ZNRF2Q8NHG8 242 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 RPL36ALQ969Q0 106 aaKnown RBP9.05□□□□□ -0.96
NR1H3-223ENST00000486991 NIT2Q9NQR4 276 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 TNFRSF18Q9Y5U5 241 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
NR1H3-223ENST00000486991 H3BNG1 76 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 PPBPP02775 128 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 RAB5AP20339 215 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 MRPL23Q16540 153 aaKnown RBP9.04□□□□□ -0.96
NR1H3-223ENST00000486991 ORMDL3Q8N138 153 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 PRELID3AQ96N28 172 aa9.04□□□□□ -0.96
NR1H3-223ENST00000486991 TRBV7-3A0A075B6L6 115 aa9.03□□□□□ -0.96
NR1H3-223ENST00000486991 A0A096LPF7 62 aa9.03□□□□□ -0.96
NR1H3-223ENST00000486991 SRIP30626 198 aa9.03□□□□□ -0.96
NR1H3-223ENST00000486991 Q6ZR54 194 aa9.03□□□□□ -0.96
NR1H3-223ENST00000486991 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.03□□□□□ -0.96
NR1H3-223ENST00000486991 TNFRSF6BO95407 300 aa9.02□□□□□ -0.97
NR1H3-223ENST00000486991 PPP1R17O96001 155 aa9.02□□□□□ -0.97
NR1H3-223ENST00000486991 NRACQ8N912 160 aa9.02□□□□□ -0.97
NR1H3-223ENST00000486991 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
NR1H3-223ENST00000486991 NPYP01303 97 aa9.01□□□□□ -0.97
NR1H3-223ENST00000486991 UBE2D3P61077 147 aa9.01□□□□□ -0.97
NR1H3-223ENST00000486991 UBE2D2P62837 147 aa9.01□□□□□ -0.97
NR1H3-223ENST00000486991 ATP6V0E2Q8NHE4 81 aa9.01□□□□□ -0.97
NR1H3-223ENST00000486991 LRP1BQ9NZR2 4599 aa9.01□□□□□ -0.97
NR1H3-223ENST00000486991 IGHV3-38A0A0C4DH36 116 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 TRBV6-5A0A0K0K1A5 114 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 TRGC2P03986 189 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 LINC00694P0DN24 101 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
NR1H3-223ENST00000486991 NEGR1Q7Z3B1 354 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms