RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 LOC389332A0A1B0GUA5 103 aa10.23□□□□□ -0.77
LRIF1-202ENST00000485275 NDUFA6P56556 154 aa10.23□□□□□ -0.77
LRIF1-202ENST00000485275 OR10J3Q5JRS4 329 aa10.23□□□□□ -0.77
LRIF1-202ENST00000485275 Q6ZTC4 211 aa10.23□□□□□ -0.77
LRIF1-202ENST00000485275 NEXN-AS1Q8NBZ9 246 aa10.23□□□□□ -0.77
LRIF1-202ENST00000485275 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
LRIF1-202ENST00000485275 K7EQD1 137 aa10.22□□□□□ -0.77
LRIF1-202ENST00000485275 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
LRIF1-202ENST00000485275 NEGR1Q7Z3B1 354 aa10.22□□□□□ -0.77
LRIF1-202ENST00000485275 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
LRIF1-202ENST00000485275 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.77
LRIF1-202ENST00000485275 SERF1AO75920 110 aa10.21□□□□□ -0.77
LRIF1-202ENST00000485275 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
LRIF1-202ENST00000485275 SUMO2P61956 95 aaKnown RBP10.21□□□□□ -0.77
LRIF1-202ENST00000485275 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.77
LRIF1-202ENST00000485275 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
LRIF1-202ENST00000485275 TRBV6-5A0A0K0K1A5 114 aa10.21□□□□□ -0.78
LRIF1-202ENST00000485275 NIT2Q9NQR4 276 aa10.21□□□□□ -0.78
LRIF1-202ENST00000485275 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 PRSS47A8MTI9 375 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 ATP5G1P05496 136 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 TMEM70Q9BUB7 260 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 MAP1LC3AQ9H492 121 aa10.2□□□□□ -0.78
LRIF1-202ENST00000485275 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 CIDEAO60543 219 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 HTN3P15516 51 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 CRYBA4P53673 196 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 POLR2KP53803 58 aaKnown RBP10.19□□□□□ -0.78
LRIF1-202ENST00000485275 NIT1Q86X76 327 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 BAGE3Q86Y29 109 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 C11orf45Q8TAV5 145 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 VSIG2Q96IQ7 327 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 SMIM2Q9BVW6 85 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 C5orf52A6NGY3 159 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 H7C1H1 209 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 SNRPEP62304 92 aaKnown RBP10.19□□□□□ -0.78
LRIF1-202ENST00000485275 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 HHLA3Q9XRX5 114 aa10.19□□□□□ -0.78
LRIF1-202ENST00000485275 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
LRIF1-202ENST00000485275 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
LRIF1-202ENST00000485275 RNASEKQ6P5S7 137 aaKnown RBP10.18□□□□□ -0.78
LRIF1-202ENST00000485275 IFITM10A6NMD0 228 aa10.17□□□□□ -0.78
LRIF1-202ENST00000485275 F5H768 121 aa10.17□□□□□ -0.78
LRIF1-202ENST00000485275 RHOHQ15669 191 aa10.17□□□□□ -0.78
LRIF1-202ENST00000485275 PMCHL1Q16048 86 aa10.17□□□□□ -0.78
LRIF1-202ENST00000485275 PRO0255Q9UI72 69 aa10.17□□□□□ -0.78
LRIF1-202ENST00000485275 TRAV26-1A0A087WT03 109 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 A0A0J9YY99 117 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 TRBV10-1A0A0K0K1A3 114 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 TRBV27A0A0K0K1C4 114 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 GAGE12JA6NER3 117 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 TCAPO15273 167 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 LINC00614P0C842 121 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 GAGE1Q13065 139 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 GAGE4Q13068 117 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 GAGE5Q13069 117 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 GAGE13Q4V321 117 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 Q8N8P6 123 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 ZNRF2Q8NHG8 242 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 PRSS3P2Q8NHM4 247 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 A0A096LNJ9 63 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 PPP1R17O96001 155 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 S100A6P06703 90 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 NHLRC4P0CG21 123 aaPredicted RBP10.16□□□□□ -0.78
LRIF1-202ENST00000485275 ESDP10768 282 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 RPL32P62910 135 aaKnown RBP10.16□□□□□ -0.78
LRIF1-202ENST00000485275 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
LRIF1-202ENST00000485275 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
LRIF1-202ENST00000485275 TRBV7-3A0A075B6L6 115 aa10.15□□□□□ -0.78
LRIF1-202ENST00000485275 UBE2D3P61077 147 aa10.15□□□□□ -0.78
LRIF1-202ENST00000485275 UBE2D2P62837 147 aa10.15□□□□□ -0.78
LRIF1-202ENST00000485275 FAM19A2Q8N3H0 131 aa10.15□□□□□ -0.78
LRIF1-202ENST00000485275 NXT2Q9NPJ8 142 aaKnown RBP10.15□□□□□ -0.78
LRIF1-202ENST00000485275 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.78
LRIF1-202ENST00000485275 DNAH7Q8WXX0 4024 aa10.15□□□□□ -0.79
LRIF1-202ENST00000485275 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 TSHBP01222 138 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 GYPEP15421 78 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 PMCHP20382 165 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 DNAJC30Q96LL9 226 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 AP5S1Q9NUS5 200 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 DYNC2H1Q8NCM8 4307 aaKnown RBP10.14□□□□□ -0.79
LRIF1-202ENST00000485275 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 PAX4O43316 350 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 FA2HQ7L5A8 372 aa10.14□□□□□ -0.79
LRIF1-202ENST00000485275 CHCHD1Q96BP2 118 aaKnown RBP10.14□□□□□ -0.79
LRIF1-202ENST00000485275 RPL36AP83881 106 aaKnown RBP10.13□□□□□ -0.79
LRIF1-202ENST00000485275 RPL36ALQ969Q0 106 aaKnown RBP10.13□□□□□ -0.79
LRIF1-202ENST00000485275 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
LRIF1-202ENST00000485275 DEFB131BA0A096LNP1 70 aa10.12□□□□□ -0.79
LRIF1-202ENST00000485275 VCYO14598 125 aa10.12□□□□□ -0.79
LRIF1-202ENST00000485275 A0A096LPF7 62 aa10.11□□□□□ -0.79
LRIF1-202ENST00000485275 I3L3M4 83 aa10.11□□□□□ -0.79
LRIF1-202ENST00000485275 HSBP1O75506 76 aa10.11□□□□□ -0.79
LRIF1-202ENST00000485275 NTM-AS1Q6ZSK4 140 aa10.11□□□□□ -0.79
LRIF1-202ENST00000485275 STARD9Q9P2P6 4700 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms