RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IGHV3-53P01767 116 aa10.08□□□□□ -0.8
CLK3-204ENST00000483723 Q6ZSN1 163 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 TRGV1A0A0A0MS02 117 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 C20orf202A1L168 122 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 SMIM9A6NGZ8 99 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 EGFEM1PQ0D2K5 195 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 Q6ZTI0 123 aa10.07□□□□□ -0.8
CLK3-204ENST00000483723 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
CLK3-204ENST00000483723 VWFP04275 2813 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 IGHV3-73A0A0B4J1V6 119 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 NUDT3O95989 172 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 LGALS9CQ6DKI2 356 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 X6R8D5 127 aa10.06□□□□□ -0.8
CLK3-204ENST00000483723 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 ATP5LO75964 103 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 G0S2P27469 103 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 APOC4P55056 127 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 OR4C5Q8NGB2 326 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 PRO1933Q9H354 126 aa10.05□□□□□ -0.8
CLK3-204ENST00000483723 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 CIDEAO60543 219 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 NEGR1Q7Z3B1 354 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 KIR2DL4Q99706 377 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
CLK3-204ENST00000483723 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 TRAV9-2A0A087WT02 112 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 KRTAP10-11P60412 298 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 LINC00612Q8N6U2 182 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
CLK3-204ENST00000483723 I3L3M4 83 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 P0DMU3 169 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 FAM231AP0DMU4 169 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 FAM231CP0DMU5 169 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 NEXN-AS1Q8NBZ9 246 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
CLK3-204ENST00000483723 A8MZ25 164 aa10.02□□□□□ -0.8
CLK3-204ENST00000483723 TSHBP01222 138 aa10.02□□□□□ -0.8
CLK3-204ENST00000483723 RHOHQ15669 191 aa10.02□□□□□ -0.8
CLK3-204ENST00000483723 ATOH7Q8N100 152 aa10.02□□□□□ -0.8
CLK3-204ENST00000483723 Q9UF83 564 aa10.02□□□□□ -0.8
CLK3-204ENST00000483723 IGHV4-30-4P0DP06 118 aa10.02□□□□□ -0.81
CLK3-204ENST00000483723 ZMAT4Q9H898 229 aa10.02□□□□□ -0.81
CLK3-204ENST00000483723 ZMAT5Q9UDW3 170 aaKnown RBP10.02□□□□□ -0.81
CLK3-204ENST00000483723 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
CLK3-204ENST00000483723 H0Y8G0 127 aa10.01□□□□□ -0.81
CLK3-204ENST00000483723 SPATA45Q537H7 98 aa10.01□□□□□ -0.81
CLK3-204ENST00000483723 ERASQ7Z444 233 aa10.01□□□□□ -0.81
CLK3-204ENST00000483723 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
CLK3-204ENST00000483723 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
CLK3-204ENST00000483723 TRBV10-1A0A0K0K1A3 114 aa10□□□□□ -0.81
CLK3-204ENST00000483723 GAGE12BA1L429 117 aa10□□□□□ -0.81
CLK3-204ENST00000483723 LINC00587B1AMM8 73 aa10□□□□□ -0.81
CLK3-204ENST00000483723 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
CLK3-204ENST00000483723 GAGE7O76087 117 aa10□□□□□ -0.81
CLK3-204ENST00000483723 GAGE12FP0CL80 117 aa10□□□□□ -0.81
CLK3-204ENST00000483723 GAGE12GP0CL81 117 aa10□□□□□ -0.81
CLK3-204ENST00000483723 GAGE12IP0CL82 117 aa10□□□□□ -0.81
CLK3-204ENST00000483723 ODF1Q14990 250 aa10□□□□□ -0.81
CLK3-204ENST00000483723 MAJINQ3KP22 176 aa10□□□□□ -0.81
CLK3-204ENST00000483723 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 PRSS1P07477 247 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 DDTP30046 118 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 PMCHL2Q9BQD1 86 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 TRAV12-1A0A0B4J245 112 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 RNF183Q96D59 192 aa9.99□□□□□ -0.81
CLK3-204ENST00000483723 TRGV2A0A075B6R0 118 aa9.98□□□□□ -0.81
CLK3-204ENST00000483723 K7EQD1 137 aa9.98□□□□□ -0.81
CLK3-204ENST00000483723 DEFB135Q30KP9 77 aa9.98□□□□□ -0.81
CLK3-204ENST00000483723 C20orf203Q8NBC4 194 aa9.98□□□□□ -0.81
CLK3-204ENST00000483723 DKK2Q9UBU2 259 aa9.98□□□□□ -0.81
CLK3-204ENST00000483723 A0A087WX48 190 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 TRBV6-4A0A1B0GX49 114 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 IGLC3P0DOY3 106 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 OR11H2Q8NH07 326 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 DEFB104AQ8WTQ1 72 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 TP53TG1Q9Y2A0 90 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
CLK3-204ENST00000483723 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 hDV102S1A0JD36 115 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 LYRM9A8MSI8 78 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 RPL39P62891 51 aaKnown RBP9.96□□□□□ -0.81
CLK3-204ENST00000483723 FHL2Q14192 279 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 Q6ZN92 141 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 BAALCQ8WXS3 180 aa9.96□□□□□ -0.81
CLK3-204ENST00000483723 MIFP14174 115 aa9.96□□□□□ -0.82
CLK3-204ENST00000483723 EMP1P54849 157 aa9.96□□□□□ -0.82
CLK3-204ENST00000483723 SAMD5Q5TGI4 173 aa9.96□□□□□ -0.82
CLK3-204ENST00000483723 ZNRF2Q8NHG8 242 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms