RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 KIAA1549Q9HCM3 1950 aa1.27□□□□□ -2.21
LAPTM4A-202ENST00000483117 NWD2Q9ULI1 1742 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 MARF1Q9Y4F3 1742 aaKnown RBP1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 LRRC37A3O60309 1634 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 SHROOM2Q13796 1616 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 BRWD1Q9NSI6 2320 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 ANKRD36BQ8N2N9 1353 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 LOC285095A0A1B0GVY8 99 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 CRYM-AS1A6NIL9 109 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 TSLPQ969D9 159 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 TRGV9Q99603 122 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 UQCR10Q9UDW1 63 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 STRCP1A6NGW2 1772 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 ABCA3Q99758 1704 aa1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 KDM5AP29375 1690 aaKnown RBP1.26□□□□□ -2.21
LAPTM4A-202ENST00000483117 LAMC3Q9Y6N6 1575 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 MYO9BQ13459 2157 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 EPRSP07814 1512 aaKnown RBP1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 PLEKHH2Q8IVE3 1493 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 SIP14410 1827 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 TRBV7-3A0A075B6L6 115 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 IGKV2-40A0A087WW87 121 aaPredicted RBP1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 TRBV6-7A0A0A0MS04 114 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 hADV29S1A0JD25 119 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 HCRTO43612 131 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 SFT2D2O95562 160 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 IGKV2D-40P01614 121 aaPredicted RBP1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 COX6CP09669 75 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 PRB4P10163 310 aaPredicted RBP1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 SEC11AP67812 179 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 C10orf128Q5T292 105 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 XAF1Q6GPH4 301 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 UNQ6190/PRO20217Q6UXQ8 127 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 Q86TA4 180 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 ZNF625Q96I27 306 aaPredicted RBP1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 NPVFQ9HCQ7 196 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 LENEPQ9Y5L5 61 aa1.25□□□□□ -2.21
LAPTM4A-202ENST00000483117 FANCAO15360 1455 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 MAGI2Q86UL8 1455 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 CITO14578 2027 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 IGKV3D-7A0A0C4DH55 119 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 IGKV3OR2-268A0A0C4DH90 116 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 K7EP34 96 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 CCL3L1P16619 93 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 ZNF56Q15929 161 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 SERP2Q8N6R1 65 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 COX7B2Q8TF08 81 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 AMELXQ99217 191 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 CACFD1Q9UGQ2 172 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 PRO1854Q9UHT4 67 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 EML5Q05BV3 1969 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 PHIPQ8WWQ0 1821 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 GOLGA3Q08378 1498 aa1.24□□□□□ -2.21
LAPTM4A-202ENST00000483117 CEP162Q5TB80 1403 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 ARAP2Q8WZ64 1704 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 MICAL3Q7RTP6 2002 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 PLIN4Q96Q06 1357 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 PTPRFP10586 1907 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 DIP2CQ9Y2E4 1556 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 UBE2D3P61077 147 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 UBE2D2P62837 147 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 DEFB103AP81534 67 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 NUMA1Q14980 2115 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 PEA15Q15121 130 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 MED12LQ86YW9 2145 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 C20orf197Q8N268 126 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 S100A13Q99584 98 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 PRO1933Q9H354 126 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 DYNLRB1Q9NP97 96 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 LINC00474Q9P2X8 69 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 DCAF1Q9Y4B6 1507 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 MDC1Q14676 2089 aaKnown RBP1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 IQSEC2Q5JU85 1478 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 MLH3Q9UHC1 1453 aa1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 COL5A3P25940 1745 aaPredicted RBP1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 DIDO1Q9BTC0 2240 aaKnown RBP1.23□□□□□ -2.21
LAPTM4A-202ENST00000483117 TRPM7Q96QT4 1865 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 UNC13BO14795 1591 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 UQCRHLA0A096LP55 91 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 LOC101927531A0A1B0GV80 90 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 BCE1O60756 84 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 CYB5AP00167 134 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 TFF1P04155 84 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 FAUP35544 74 aaKnown RBP1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 KLKP1Q107X0 134 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 FXYD3Q14802 87 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 ZNF563Q8TA94 476 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 ZCCHC13Q8WW36 166 aaKnown RBP1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 MANBALQ9NQG1 85 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 R4GMQ9 66 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 V9GYH0 126 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 V9GYV3 84 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 CHD1O14646 1710 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 RP1P56715 2156 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 ATP10BO94823 1461 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 CTTNBP2Q8WZ74 1663 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 MPDZO75970 2070 aa1.22□□□□□ -2.21
LAPTM4A-202ENST00000483117 DLEC1Q9Y238 1755 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms