RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TWIST1Q15672 202 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 CT83Q5H943 113 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 C15orf54Q8N8G6 183 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 BORCS7Q96B45 105 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 PGLYRP4Q96LB8 373 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 MSRB1Q9NZV6 116 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 LY96Q9Y6Y9 160 aa6.85□□□□□ -1.31
SPTLC1-206ENST00000482632 A8MWL6 223 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 C9JQL5 133 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 NTF3P20783 257 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 EVI2AP22794 236 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 RAB4BP61018 213 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 FAM74A3Q4VXF1 159 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 GTSF1LQ9H1H1 148 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 Q9UF83 564 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 NAT8Q9UHE5 227 aa6.84□□□□□ -1.31
SPTLC1-206ENST00000482632 TRAV9-2A0A087WT02 112 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 RTL8CO15255 209 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 IGHV3-30P01768 117 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 IGHV3-33P01772 117 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 IGHV3-30-3P0DP02 117 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 IGHV3-30-5P0DP03 117 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 LELP1Q5T871 98 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 SMIM15Q7Z3B0 74 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 KRTAP1-5Q9BYS1 174 aa6.83□□□□□ -1.32
SPTLC1-206ENST00000482632 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 TRBV10-1A0A0K0K1A3 114 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 CTRLP40313 264 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 RPL23P62829 140 aaKnown RBP6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 NEXN-AS1Q8NBZ9 246 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 DPH3P1Q9H4G8 78 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
SPTLC1-206ENST00000482632 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 H7C1H1 209 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 TIRAPP58753 221 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 LINC00315P59091 139 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 ISOC2Q96AB3 205 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 OSTCQ9NRP0 149 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
SPTLC1-206ENST00000482632 A0A087WWC5 75 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 HIGD1CA8MV81 97 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 LINC00694P0DN24 101 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 KCNIP4Q6PIL6 250 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 Q9HAA7 133 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 KIF25-AS1Q9Y6Z4 181 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 URGCP-MRPS24S4R325 110 aa6.8□□□□□ -1.32
SPTLC1-206ENST00000482632 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 DNAH10OSP0CZ25 163 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 UBE2D3P61077 147 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 UBE2D2P62837 147 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 IFITM2Q01629 132 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 CLLU1Q5K131 121 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 WDR73Q6P4I2 378 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 C10orf126Q8N4M7 172 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 V9GYV3 84 aa6.79□□□□□ -1.32
SPTLC1-206ENST00000482632 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 A0A1B0GUT8 65 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 TMEM262E9PQX1 116 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 PSCAO43653 123 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 FOXA3P55318 350 aaPredicted RBP6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 LINC01556Q5JQF7 62 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 RASL11AQ6T310 242 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
SPTLC1-206ENST00000482632 A0A087WX48 190 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 M0QY20 66 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 RIGQ13278 110 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 NFE4Q86UQ8 179 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 CHCHD5Q9BSY4 110 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 GFRA4Q9GZZ7 299 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 NAT8BQ9UHF3 227 aa6.77□□□□□ -1.33
SPTLC1-206ENST00000482632 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 DAZ4Q86SG3 579 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 COMMD7Q86VX2 200 aa6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 NUP35Q8NFH5 326 aa6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 DAZ3Q9NR90 486 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-206ENST00000482632 TRBV25-1A0A075B6N4 114 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 K7EP13 123 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 ODF1Q14990 250 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 TMEM97Q5BJF2 176 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 MRPL54Q6P161 138 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 GATD1Q8NB37 220 aa6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 RPL39LQ96EH5 51 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-206ENST00000482632 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
SPTLC1-206ENST00000482632 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms