RNA–Protein interactions for RNA: ENST00000479795.1

TNXB-204, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 2,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-204ENST00000479795 BBC3Q96PG8 261 aaPredicted RBP12.94□□□□□ -0.34
TNXB-204ENST00000479795 LINC00315P59091 139 aa12.94□□□□□ -0.34
TNXB-204ENST00000479795 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
TNXB-204ENST00000479795 A0A096LNT2 108 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 LINC01549A6NIU2 74 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 DSCR9P59020 149 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 TEN1Q86WV5 123 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
TNXB-204ENST00000479795 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 KIF25-AS1Q9Y6Z4 181 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 F8VRH5 84 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 H7C1H1 209 aa12.93□□□□□ -0.34
TNXB-204ENST00000479795 RPL32P62910 135 aaKnown RBP12.93□□□□□ -0.34
TNXB-204ENST00000479795 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
TNXB-204ENST00000479795 A0A087WW49 117 aa12.92□□□□□ -0.34
TNXB-204ENST00000479795 SPINK13Q1W4C9 94 aa12.92□□□□□ -0.34
TNXB-204ENST00000479795 PLNP26678 52 aa12.92□□□□□ -0.34
TNXB-204ENST00000479795 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
TNXB-204ENST00000479795 SUMO4Q6EEV6 95 aa12.91□□□□□ -0.34
TNXB-204ENST00000479795 NEXN-AS1Q8NBZ9 246 aa12.91□□□□□ -0.34
TNXB-204ENST00000479795 BAALCQ8WXS3 180 aa12.91□□□□□ -0.34
TNXB-204ENST00000479795 DUSP14O95147 198 aaKnown RBP12.91□□□□□ -0.34
TNXB-204ENST00000479795 CCDC179H3BU77 68 aa12.9□□□□□ -0.34
TNXB-204ENST00000479795 EMP1P54849 157 aa12.9□□□□□ -0.34
TNXB-204ENST00000479795 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.34
TNXB-204ENST00000479795 A0A0J9YX75 114 aa12.9□□□□□ -0.34
TNXB-204ENST00000479795 DEFB136Q30KP8 78 aa12.9□□□□□ -0.34
TNXB-204ENST00000479795 ACANP16112 2415 aa12.9□□□□□ -0.34
TNXB-204ENST00000479795 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
TNXB-204ENST00000479795 TRAV12-1A0A0B4J245 112 aa12.9□□□□□ -0.35
TNXB-204ENST00000479795 NXPH4O95158 308 aa12.9□□□□□ -0.35
TNXB-204ENST00000479795 C18orf65Q6ZTR6 163 aa12.9□□□□□ -0.35
TNXB-204ENST00000479795 CITED1Q99966 193 aa12.9□□□□□ -0.35
TNXB-204ENST00000479795 ZNF580Q9UK33 172 aa12.9□□□□□ -0.35
TNXB-204ENST00000479795 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 COX6B1P14854 86 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 RPL39P62891 51 aaKnown RBP12.89□□□□□ -0.35
TNXB-204ENST00000479795 Q8N1Y9 231 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 K7EQG2 157 aa12.89□□□□□ -0.35
TNXB-204ENST00000479795 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
TNXB-204ENST00000479795 HTN1P15515 57 aa12.88□□□□□ -0.35
TNXB-204ENST00000479795 DUX3Q96PT4 197 aa12.88□□□□□ -0.35
TNXB-204ENST00000479795 TP53TG1Q9Y2A0 90 aa12.88□□□□□ -0.35
TNXB-204ENST00000479795 APCP25054 2843 aa12.88□□□□□ -0.35
TNXB-204ENST00000479795 IGHV3-16A0A0C4DH30 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE12JA6NER3 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE7O76087 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE12FP0CL80 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE12GP0CL81 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE12IP0CL82 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 GAGE4Q13068 117 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
TNXB-204ENST00000479795 MTORP42345 2549 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 AKAP9Q99996 3911 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 RHODO00212 210 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 LGALS1P09382 135 aaKnown RBP12.87□□□□□ -0.35
TNXB-204ENST00000479795 NDUFV3P56181 108 aaKnown RBP12.87□□□□□ -0.35
TNXB-204ENST00000479795 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
TNXB-204ENST00000479795 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
TNXB-204ENST00000479795 TCL1BO95988 128 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 UBE2D3P61077 147 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 UBE2D2P62837 147 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 VCX2Q9H322 139 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 SDHAF1A6NFY7 115 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 ZNF56Q15929 161 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 POM121L12Q8N7R1 296 aa12.86□□□□□ -0.35
TNXB-204ENST00000479795 LINC01619G3V211 115 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 PPP1R17O96001 155 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 TSHBP01222 138 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 IGHV4-31P0DP07 118 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 SLURP1P55000 103 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 A8MWV9 139 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 J3QLI3 93 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 POLR2KP53803 58 aaKnown RBP12.85□□□□□ -0.35
TNXB-204ENST00000479795 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 Q6YL49 198 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
TNXB-204ENST00000479795 PRM2P04554 102 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 CRYGDP07320 174 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 KNCNA6PVL3 124 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 TMEM262E9PQX1 116 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 CRLF1O75462 422 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 UBE2D1P51668 147 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 PRADC1Q9BSG0 188 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 CR1P17927 2039 aa12.84□□□□□ -0.35
TNXB-204ENST00000479795 IGHV1OR15-1A0A075B7D0 117 aa12.83□□□□□ -0.35
TNXB-204ENST00000479795 HIST2H2BCQ6DN03 193 aa12.83□□□□□ -0.35
TNXB-204ENST00000479795 C9orf85Q96MD7 179 aa12.83□□□□□ -0.35
TNXB-204ENST00000479795 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
TNXB-204ENST00000479795 VCYO14598 125 aa12.82□□□□□ -0.36
TNXB-204ENST00000479795 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
TNXB-204ENST00000479795 KLHL30-AS1Q8NEE0 82 aa12.82□□□□□ -0.36
TNXB-204ENST00000479795 ELANEP08246 267 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms