RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 B4DEV8 164 aa10.92□□□□□ -0.66
VIM-204ENST00000478746 ARMS2P0C7Q2 107 aa10.92□□□□□ -0.66
VIM-204ENST00000478746 BLOC1S1P78537 153 aa10.92□□□□□ -0.66
VIM-204ENST00000478746 SFRP2Q96HF1 295 aa10.92□□□□□ -0.66
VIM-204ENST00000478746 LINC01600Q96MT4 127 aa10.92□□□□□ -0.66
VIM-204ENST00000478746 TRAV34A0A0B4J273 112 aa10.91□□□□□ -0.66
VIM-204ENST00000478746 CLRN3Q8NCR9 226 aa10.91□□□□□ -0.66
VIM-204ENST00000478746 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
VIM-204ENST00000478746 TRAV1-1A0A0B4J248 108 aa10.9□□□□□ -0.66
VIM-204ENST00000478746 ODF1Q14990 250 aa10.9□□□□□ -0.66
VIM-204ENST00000478746 RNF185Q96GF1 192 aa10.9□□□□□ -0.66
VIM-204ENST00000478746 A0A087WYN8 130 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 UBE2G2P60604 165 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 PKIAP61925 76 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 CHCHD5Q9BSY4 110 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 PHLDA3Q9Y5J5 127 aa10.89□□□□□ -0.67
VIM-204ENST00000478746 A0A1W2PRE2 83 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 KRBOX1C9JBD0 128 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 M0R036 132 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 M0R381 172 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 KRTAP26-1Q6PEX3 210 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
VIM-204ENST00000478746 IGHV3-64A0A075B6Q5 118 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 PHOX2AO14813 284 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 GAS8-AS1O95177 125 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 IFNA1P01562 189 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
VIM-204ENST00000478746 CCL20P78556 96 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 CST9LP1Q5W188 147 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 Q86TA4 180 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 C7orf33Q8WU49 177 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 NKX6-2Q9C056 277 aaPredicted RBP10.87□□□□□ -0.67
VIM-204ENST00000478746 PRR34Q9NV39 138 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 GNG13Q9P2W3 67 aa10.87□□□□□ -0.67
VIM-204ENST00000478746 hDV102S1A0JD36 115 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 FAM74A7A6NL05 159 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 PAGE4O60829 102 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 CHTF8P0CG12 524 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 CRIP1P50238 77 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 CLPSL2Q6UWE3 100 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 LINC00269Q8N2A0 174 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.86□□□□□ -0.67
VIM-204ENST00000478746 MANBALQ9NQG1 85 aa10.86□□□□□ -0.67
VIM-204ENST00000478746 PEX7O00628 323 aa10.85□□□□□ -0.67
VIM-204ENST00000478746 SH2D1AO60880 128 aa10.85□□□□□ -0.67
VIM-204ENST00000478746 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
VIM-204ENST00000478746 RAB4BP61018 213 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 RAB14P61106 215 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 FAM162BQ5T6X4 162 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 ZFP82Q8N141 532 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 NEXN-AS1Q8NBZ9 246 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 SPACA4Q8TDM5 124 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 AP5S1Q9NUS5 200 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 PLAC8Q9NZF1 115 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 ZFP30Q9Y2G7 519 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 KIF25-AS1Q9Y6Z4 181 aa10.84□□□□□ -0.67
VIM-204ENST00000478746 A0A0J9YXV3 536 aa10.83□□□□□ -0.68
VIM-204ENST00000478746 RBX1P62877 108 aa10.83□□□□□ -0.68
VIM-204ENST00000478746 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
VIM-204ENST00000478746 LYPD6BQ8NI32 183 aa10.83□□□□□ -0.68
VIM-204ENST00000478746 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
VIM-204ENST00000478746 TMSB15BA0A087X1C1 80 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 TAGLN2P37802 199 aaKnown RBP10.82□□□□□ -0.68
VIM-204ENST00000478746 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 IFITM2Q01629 132 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 GAGE6Q13070 117 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 WDR73Q6P4I2 378 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 TCEAL7Q9BRU2 100 aa10.82□□□□□ -0.68
VIM-204ENST00000478746 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 SLPIP03973 132 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 BCL2P10415 239 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 ZNF56Q15929 161 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 TMEM97Q5BJF2 176 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
VIM-204ENST00000478746 UBE2G1P62253 170 aa10.8□□□□□ -0.68
VIM-204ENST00000478746 MEF2BQ02080 365 aaPredicted RBP10.8□□□□□ -0.68
VIM-204ENST00000478746 ZNF674Q2M3X9 581 aa10.8□□□□□ -0.68
VIM-204ENST00000478746 PRR27Q6MZM9 219 aa10.8□□□□□ -0.68
VIM-204ENST00000478746 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
VIM-204ENST00000478746 VAX2Q9UIW0 290 aa10.8□□□□□ -0.68
VIM-204ENST00000478746 REG3AQ06141 175 aa10.79□□□□□ -0.68
VIM-204ENST00000478746 DERL1Q9BUN8 251 aa10.79□□□□□ -0.68
VIM-204ENST00000478746 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
VIM-204ENST00000478746 AKR1C3P42330 323 aa10.78□□□□□ -0.68
VIM-204ENST00000478746 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
VIM-204ENST00000478746 EIF5A2Q9GZV4 153 aaKnown RBP10.78□□□□□ -0.68
VIM-204ENST00000478746 TRAV8-4A0A0B4J246 113 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 F5H697 171 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 PDE6DO43924 150 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 P01737 135 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 CLLU1Q5K131 121 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 FAM210AQ96ND0 272 aa10.77□□□□□ -0.69
VIM-204ENST00000478746 LTAP01374 205 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms