RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	MYH6	P13533	1939 aa		1.16	□□□□□ -2.22
RBM39-231	ENST00000477334	NAV2	Q8IVL1	2488 aa		1.16	□□□□□ -2.22
RBM39-231	ENST00000477334	CUL7	Q14999	1698 aa		1.16	□□□□□ -2.22
RBM39-231	ENST00000477334	BDP1	A6H8Y1	2624 aa		1.16	□□□□□ -2.22
RBM39-231	ENST00000477334	FLNB	O75369	2602 aa	Known RBP	1.16	□□□□□ -2.22
RBM39-231	ENST00000477334		A0A1W2PPM0	123 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	RBAKDN	A6NC62	111 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	ZNF56	Q15929	161 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	C8orf59	Q8N0T1	100 aa	Predicted RBP	1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	LINC00208	Q96KT6	92 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	AQP10	Q96PS8	301 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	DSCR8	Q96T75	97 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	IFT140	Q96RY7	1462 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	EML5	Q05BV3	1969 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	RANBP2	P49792	3224 aa	Known RBP	1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	CHD3	Q12873	2000 aa	Known RBP	1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	BCORL1	Q5H9F3	1711 aa		1.15	□□□□□ -2.23
RBM39-231	ENST00000477334	ZNF142	P52746	1687 aa	Predicted RBP	1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	THOC2	Q8NI27	1593 aa	Known RBP	1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	TEP1	Q99973	2627 aa	Known RBP	1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	PIEZO1	Q92508	2521 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	TRAV13-2	A0A0B4J235	113 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	ATP6V1G2-DDX39B	F2Z307	99 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	KALRN	O60229	2985 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	FXYD6P3	P58550	94 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	SSBP1	Q04837	148 aa	Known RBP	1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	KLKP1	Q107X0	134 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	C20orf197	Q8N268	126 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	TMEM14B	Q9NUH8	114 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	EP400	Q96L91	3159 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	CASP8AP2	Q9UKL3	1982 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	DNAH12	Q6ZR08	3092 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	ASH1L	Q9NR48	2969 aa	Known RBP	1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	PLXNA2	O75051	1894 aa		1.14	□□□□□ -2.23
RBM39-231	ENST00000477334	DLEC1	Q9Y238	1755 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	SPAG17	Q6Q759	2223 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	DOPEY1	Q5JWR5	2465 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	TECTA	O75443	2155 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	FASN	P49327	2511 aa	Known RBP	1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	FAM24A	A6NFZ4	105 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	CCL3L1	P16619	93 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	UBE2D1	P51668	147 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	CCL8	P80075	99 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	INSL4	Q14641	139 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	ZNF818P	Q6ZRF7	136 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334		Q8N8P6	123 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	IER3IP1	Q9Y5U9	82 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	PTPN13	Q12923	2485 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	TET1	Q8NFU7	2136 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	AKAP11	Q9UKA4	1901 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	ABCA2	Q9BZC7	2435 aa		1.13	□□□□□ -2.23
RBM39-231	ENST00000477334	C5orf42	Q9H799	3197 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	ZGRF1	Q86YA3	2104 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	MAPKBP1	O60336	1514 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	SMIM6	P0DI80	62 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	SPINK13	Q1W4C9	94 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	C10orf99	Q6UWK7	81 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	COX7B2	Q8TF08	81 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	EPG5	Q9HCE0	2579 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	QRICH2	Q9H0J4	1663 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	CPSF1	Q10570	1443 aa	Known RBP	1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	CASKIN1	Q8WXD9	1431 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	ANKRD17	O75179	2603 aa	Known RBP	1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	NRK	Q7Z2Y5	1582 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	ITPR3	Q14573	2671 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	PZP	P20742	1482 aa		1.12	□□□□□ -2.23
RBM39-231	ENST00000477334	LAMB1	P07942	1786 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	RBBP6	Q7Z6E9	1792 aa	Known RBP	1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	MYH9	P35579	1960 aa	Known RBP	1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	TRBV7-1	A0A0A6YYK4	115 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	IFITM1	P13164	125 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	SPINT3	P49223	89 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	ATP5E	P56381	51 aa	Predicted RBP	1.11	□□□□□ -2.23
RBM39-231	ENST00000477334		V9GYV3	84 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	RB1CC1	Q8TDY2	1594 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	MUC3A	Q02505	3323 aa		1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	SPTBN5	Q9NRC6	3674 aa	Known RBP	1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	GCN1	Q92616	2671 aa	Known RBP	1.11	□□□□□ -2.23
RBM39-231	ENST00000477334	BPTF	Q12830	3046 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	ZNF292	O60281	2723 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	ABCA12	Q86UK0	2595 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	CFAP43	Q8NDM7	1665 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	MKI67	P46013	3256 aa	Known RBP	1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	NWD2	Q9ULI1	1742 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	OOSP1	A8MZH6	123 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	HCG22	E2RYF7	251 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334		F2Z2F3	143 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	SSSCA1	O60232	199 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	C5orf38	Q86SI9	138 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	CENPF	P49454	3210 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	CFAP54	Q96N23	3096 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	HECTD1	Q9ULT8	2610 aa		1.1	□□□□□ -2.23
RBM39-231	ENST00000477334	ASCC3	Q8N3C0	2202 aa	Known RBP	1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	NIN	Q8N4C6	2090 aa		1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	SMARCA2	P51531	1590 aa		1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	ATG2A	Q2TAZ0	1938 aa		1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	WDFY4	Q6ZS81	3184 aa		1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	MUC22	E2RYF6	1773 aa	Predicted RBP	1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	UBE2L5P	A0A1B0GUS4	154 aa		1.09	□□□□□ -2.23
RBM39-231	ENST00000477334	TMEM218	A2RU14	115 aa		1.09	□□□□□ -2.23

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