RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 SUMO4Q6EEV6 95 aa11.64□□□□□ -0.55
RPN1-202ENST00000476931 DAZ4Q86SG3 579 aaKnown RBP11.64□□□□□ -0.55
RPN1-202ENST00000476931 NEXN-AS1Q8NBZ9 246 aa11.64□□□□□ -0.55
RPN1-202ENST00000476931 NIT2Q9NQR4 276 aa11.64□□□□□ -0.55
RPN1-202ENST00000476931 DAZ3Q9NR90 486 aaKnown RBP11.64□□□□□ -0.55
RPN1-202ENST00000476931 LYSTQ99698 3801 aa11.64□□□□□ -0.55
RPN1-202ENST00000476931 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
RPN1-202ENST00000476931 TRAV8-6A0A0B4J262 113 aa11.63□□□□□ -0.55
RPN1-202ENST00000476931 K7EP13 123 aa11.63□□□□□ -0.55
RPN1-202ENST00000476931 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
RPN1-202ENST00000476931 LELP1Q5T871 98 aa11.63□□□□□ -0.55
RPN1-202ENST00000476931 Q9UF83 564 aa11.63□□□□□ -0.55
RPN1-202ENST00000476931 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
RPN1-202ENST00000476931 SIVA1O15304 175 aa11.62□□□□□ -0.55
RPN1-202ENST00000476931 HBBP68871 147 aa11.62□□□□□ -0.55
RPN1-202ENST00000476931 RHEBQ15382 184 aa11.62□□□□□ -0.55
RPN1-202ENST00000476931 KCNIP4Q6PIL6 250 aa11.62□□□□□ -0.55
RPN1-202ENST00000476931 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 PPP1R17O96001 155 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 RAB4AP20338 218 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 SVBPQ8N300 66 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 CLRN3Q8NCR9 226 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 MRAP2Q96G30 205 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 BTF3L4Q96K17 158 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
RPN1-202ENST00000476931 TRAV9-1A0A075B6T8 112 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 C7orf77A4D0Y5 90 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 SNAPINO95295 136 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 CAMPP49913 170 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 TTC32Q5I0X7 151 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 GATD1Q8NB37 220 aa11.6□□□□□ -0.55
RPN1-202ENST00000476931 A0A1B0GXF2 115 aa11.59□□□□□ -0.55
RPN1-202ENST00000476931 APOC3P02656 99 aa11.59□□□□□ -0.55
RPN1-202ENST00000476931 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
RPN1-202ENST00000476931 S100PP25815 95 aa11.59□□□□□ -0.55
RPN1-202ENST00000476931 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
RPN1-202ENST00000476931 FAM104BQ5XKR9 115 aa11.59□□□□□ -0.55
RPN1-202ENST00000476931 NBDYA0A0U1RRE5 68 aa11.58□□□□□ -0.56
RPN1-202ENST00000476931 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
RPN1-202ENST00000476931 RNF185Q96GF1 192 aa11.58□□□□□ -0.56
RPN1-202ENST00000476931 IGLV2-18A0A075B6J9 118 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 IGHV3-38A0A0C4DH36 116 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 DNAH10OSP0CZ25 163 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 Q6ZR54 194 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
RPN1-202ENST00000476931 TRBV6-8A0A0A6YYG3 113 aa11.56□□□□□ -0.56
RPN1-202ENST00000476931 TRAV26-2A0A0B4J265 109 aa11.56□□□□□ -0.56
RPN1-202ENST00000476931 PKIAP61925 76 aa11.56□□□□□ -0.56
RPN1-202ENST00000476931 PPBPP02775 128 aa11.55□□□□□ -0.56
RPN1-202ENST00000476931 LINC01556Q5JQF7 62 aa11.55□□□□□ -0.56
RPN1-202ENST00000476931 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
RPN1-202ENST00000476931 M0R2N4 97 aa11.54□□□□□ -0.56
RPN1-202ENST00000476931 MRPL51Q4U2R6 128 aaKnown RBP11.54□□□□□ -0.56
RPN1-202ENST00000476931 WFDC10BQ8IUB3 73 aa11.54□□□□□ -0.56
RPN1-202ENST00000476931 SLC7A5P1Q8MH63 180 aa11.54□□□□□ -0.56
RPN1-202ENST00000476931 ST20Q9HBF5 79 aa11.54□□□□□ -0.56
RPN1-202ENST00000476931 CKS2P33552 79 aa11.53□□□□□ -0.56
RPN1-202ENST00000476931 COX19Q49B96 90 aa11.53□□□□□ -0.56
RPN1-202ENST00000476931 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
RPN1-202ENST00000476931 TRBV24-1A0A075B6N3 115 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 TRBV25-1A0A075B6N4 114 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 NCR2O95944 276 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 COTL1Q14019 142 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 RPL39LQ96EH5 51 aaKnown RBP11.52□□□□□ -0.57
RPN1-202ENST00000476931 URGCP-MRPS24S4R325 110 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 KMT2AQ03164 3969 aa11.52□□□□□ -0.57
RPN1-202ENST00000476931 RYR2Q92736 4967 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 SDHAF1A6NFY7 115 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 I3L3M4 83 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 PHOX2AO14813 284 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 IQCJQ1A5X6 159 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 C1orf134Q5TEV5 83 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 C20orf78Q9BR46 151 aa11.51□□□□□ -0.57
RPN1-202ENST00000476931 VCYO14598 125 aa11.5□□□□□ -0.57
RPN1-202ENST00000476931 PMCHP20382 165 aa11.5□□□□□ -0.57
RPN1-202ENST00000476931 POLR2KP53803 58 aaKnown RBP11.5□□□□□ -0.57
RPN1-202ENST00000476931 ELOBQ15370 118 aa11.5□□□□□ -0.57
RPN1-202ENST00000476931 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
RPN1-202ENST00000476931 DNAH6Q9C0G6 4158 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 A0A087WX48 190 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 TRBV27A0A0K0K1C4 114 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 NIT1Q86X76 327 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 ORMDL3Q8N138 153 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 C6orf223Q8N319 242 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 NRACQ8N912 160 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
RPN1-202ENST00000476931 TCAPO15273 167 aa11.48□□□□□ -0.57
RPN1-202ENST00000476931 RPS10P46783 165 aaKnown RBP11.48□□□□□ -0.57
RPN1-202ENST00000476931 SUMO2P61956 95 aaKnown RBP11.48□□□□□ -0.57
RPN1-202ENST00000476931 RPL32P62910 135 aaKnown RBP11.48□□□□□ -0.57
RPN1-202ENST00000476931 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
RPN1-202ENST00000476931 GNB1LQ9BYB4 327 aa11.48□□□□□ -0.57
RPN1-202ENST00000476931 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms