RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 H3BMM0 161 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 POLR2KP53803 58 aaKnown RBP12.24□□□□□ -0.45
TVP23B-202ENST00000476139 CYSLTR1Q9Y271 337 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 OR11H12B2RN74 326 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 PPP1R17O96001 155 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 CD300EQ496F6 205 aaPredicted RBP12.24□□□□□ -0.45
TVP23B-202ENST00000476139 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
TVP23B-202ENST00000476139 TP53TG1Q9Y2A0 90 aa12.24□□□□□ -0.45
TVP23B-202ENST00000476139 UNC79Q9P2D8 2635 aa12.23□□□□□ -0.45
TVP23B-202ENST00000476139 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
TVP23B-202ENST00000476139 ZNF56Q15929 161 aa12.23□□□□□ -0.45
TVP23B-202ENST00000476139 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
TVP23B-202ENST00000476139 TRAV12-1A0A0B4J245 112 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 DEFB114Q30KQ6 69 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 DYNLRB2Q8TF09 96 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 PHLDA1Q8WV24 401 aaPredicted RBP12.22□□□□□ -0.45
TVP23B-202ENST00000476139 M0QY20 66 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 KRTAP1-1Q07627 177 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 ZFP2Q6ZN57 461 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 RAX2Q96IS3 184 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
TVP23B-202ENST00000476139 TSHBP01222 138 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 RIPPLY3P57055 190 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 TMEM86BQ8N661 226 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 IGHV3-73A0A0B4J1V6 119 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 SCGB2A2Q13296 93 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 MTURNQ8N3F0 131 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
TVP23B-202ENST00000476139 KMT2BQ9UMN6 2715 aaPredicted RBP12.21□□□□□ -0.46
TVP23B-202ENST00000476139 ANK3Q12955 4377 aaKnown RBP12.21□□□□□ -0.46
TVP23B-202ENST00000476139 MYMXA0A1B0GTQ4 84 aa12.21□□□□□ -0.46
TVP23B-202ENST00000476139 CD28P10747 220 aa12.21□□□□□ -0.46
TVP23B-202ENST00000476139 PLA2G2AP14555 144 aa12.21□□□□□ -0.46
TVP23B-202ENST00000476139 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.46
TVP23B-202ENST00000476139 K7ERU9 68 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 VCYO14598 125 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 NACAE9PAV3 2078 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 C12orf74Q32Q52 190 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 PLEKHB2Q96CS7 222 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 KIR2DL4Q99706 377 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 YAE1D1Q9NRH1 226 aa12.2□□□□□ -0.46
TVP23B-202ENST00000476139 PROK1P58294 105 aa12.19□□□□□ -0.46
TVP23B-202ENST00000476139 SFTA2Q6UW10 78 aa12.19□□□□□ -0.46
TVP23B-202ENST00000476139 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
TVP23B-202ENST00000476139 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
TVP23B-202ENST00000476139 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
TVP23B-202ENST00000476139 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 IGLL5B9A064 214 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 SCGB1D4Q6XE38 83 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 J3QKU1 62 aa12.18□□□□□ -0.46
TVP23B-202ENST00000476139 P0DMU3 169 aa12.17□□□□□ -0.46
TVP23B-202ENST00000476139 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
TVP23B-202ENST00000476139 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
TVP23B-202ENST00000476139 RPL32P62910 135 aaKnown RBP12.17□□□□□ -0.46
TVP23B-202ENST00000476139 CITED2Q99967 270 aaPredicted RBP12.17□□□□□ -0.46
TVP23B-202ENST00000476139 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
TVP23B-202ENST00000476139 Q9UF83 564 aa12.17□□□□□ -0.46
TVP23B-202ENST00000476139 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 A8MTW9 85 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 CCL24O00175 119 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 TMEM170BQ5T4T1 132 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
TVP23B-202ENST00000476139 H3BMG7 143 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
TVP23B-202ENST00000476139 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 E9PLD3 99 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 OR5A1Q8NGJ0 315 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 HECTD1Q9ULT8 2610 aa12.15□□□□□ -0.46
TVP23B-202ENST00000476139 SETXQ7Z333 2677 aaKnown RBP12.15□□□□□ -0.46
TVP23B-202ENST00000476139 TRAV2A0A0B4J234 112 aa12.15□□□□□ -0.47
TVP23B-202ENST00000476139 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.47
TVP23B-202ENST00000476139 NOTCH2Q04721 2471 aa12.15□□□□□ -0.47
TVP23B-202ENST00000476139 ODF3L2Q3SX64 289 aa12.14□□□□□ -0.47
TVP23B-202ENST00000476139 LINC01587Q99440 93 aa12.14□□□□□ -0.47
TVP23B-202ENST00000476139 TRPT1Q86TN4 253 aaKnown RBP12.14□□□□□ -0.47
TVP23B-202ENST00000476139 TEX29Q8N6K0 151 aa12.14□□□□□ -0.47
TVP23B-202ENST00000476139 SMR3AQ99954 134 aa12.14□□□□□ -0.47
TVP23B-202ENST00000476139 XCL2Q9UBD3 114 aa12.14□□□□□ -0.47
TVP23B-202ENST00000476139 WFDC2Q14508 124 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 FHL3Q13643 280 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 PMVKQ15126 192 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 ZNRF2Q8NHG8 242 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
TVP23B-202ENST00000476139 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
TVP23B-202ENST00000476139 Q6ZSN1 163 aa12.12□□□□□ -0.47
TVP23B-202ENST00000476139 TEX48A0A1B0GUV7 120 aa12.12□□□□□ -0.47
TVP23B-202ENST00000476139 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
TVP23B-202ENST00000476139 TAL2Q16559 108 aa12.12□□□□□ -0.47
TVP23B-202ENST00000476139 G3V4G9 280 aa12.11□□□□□ -0.47
TVP23B-202ENST00000476139 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
TVP23B-202ENST00000476139 APOMO95445 188 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms