RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DNAJC30Q96LL9 226 aa15.86■□□□□ 0.13
CCM2-206ENST00000474617 I3L3M4 83 aa15.85■□□□□ 0.13
CCM2-206ENST00000474617 HTN1P15515 57 aa15.85■□□□□ 0.13
CCM2-206ENST00000474617 PAPPA-AS1Q5QFB9 102 aa15.85■□□□□ 0.13
CCM2-206ENST00000474617 LINC00482Q8N8I6 264 aa15.85■□□□□ 0.13
CCM2-206ENST00000474617 BOD1L2Q8IYS8 172 aa15.84■□□□□ 0.13
CCM2-206ENST00000474617 NEXN-AS1Q8NBZ9 246 aa15.84■□□□□ 0.13
CCM2-206ENST00000474617 IL17DQ8TAD2 202 aa15.84■□□□□ 0.13
CCM2-206ENST00000474617 XCL2Q9UBD3 114 aa15.84■□□□□ 0.13
CCM2-206ENST00000474617 TMEM263Q8WUH6 116 aaKnown RBP15.84■□□□□ 0.13
CCM2-206ENST00000474617 HHLA3Q9XRX5 114 aa15.84■□□□□ 0.13
CCM2-206ENST00000474617 RS1O15537 224 aa15.83■□□□□ 0.12
CCM2-206ENST00000474617 CIDEAO60543 219 aa15.83■□□□□ 0.12
CCM2-206ENST00000474617 ANKRD39Q53RE8 183 aa15.83■□□□□ 0.12
CCM2-206ENST00000474617 C1orf158Q8N1D5 194 aa15.83■□□□□ 0.12
CCM2-206ENST00000474617 NOTCH2Q04721 2471 aa15.82■□□□□ 0.12
CCM2-206ENST00000474617 NPSP0C0P6 89 aa15.82■□□□□ 0.12
CCM2-206ENST00000474617 CFAP126Q5VTH2 177 aa15.82■□□□□ 0.12
CCM2-206ENST00000474617 C19orf73Q9NVV2 129 aa15.82■□□□□ 0.12
CCM2-206ENST00000474617 MRPL35Q9NZE8 188 aaKnown RBP15.82■□□□□ 0.12
CCM2-206ENST00000474617 OTOGQ6ZRI0 2925 aa15.82■□□□□ 0.12
CCM2-206ENST00000474617 CHTOPQ9Y3Y2 248 aaKnown RBP15.81■□□□□ 0.12
CCM2-206ENST00000474617 IGIPA6NJ69 53 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 IGHV3-53P01767 116 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 KRTAP10-3P60369 221 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 STPG4Q8N801 248 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 RNASE8Q8TDE3 154 aaKnown RBP15.8■□□□□ 0.12
CCM2-206ENST00000474617 BAALCQ8WXS3 180 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 TP53TG1Q9Y2A0 90 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 TNFRSF18Q9Y5U5 241 aa15.8■□□□□ 0.12
CCM2-206ENST00000474617 FGF6P10767 208 aa15.79■□□□□ 0.12
CCM2-206ENST00000474617 C9orf66Q5T8R8 295 aa15.79■□□□□ 0.12
CCM2-206ENST00000474617 C16orf74Q96GX8 76 aa15.79■□□□□ 0.12
CCM2-206ENST00000474617 DAZ2Q13117 558 aaKnown RBP15.78■□□□□ 0.12
CCM2-206ENST00000474617 A0A1B0GV90 55 aa15.78■□□□□ 0.12
CCM2-206ENST00000474617 BATFQ16520 125 aa15.78■□□□□ 0.12
CCM2-206ENST00000474617 WNK1Q9H4A3 2382 aa15.78■□□□□ 0.12
CCM2-206ENST00000474617 CRYBA4P53673 196 aa15.77■□□□□ 0.11
CCM2-206ENST00000474617 PMVKQ15126 192 aa15.77■□□□□ 0.11
CCM2-206ENST00000474617 TMEM97Q5BJF2 176 aa15.77■□□□□ 0.11
CCM2-206ENST00000474617 ZC2HC1BQ5TFG8 222 aa15.77■□□□□ 0.11
CCM2-206ENST00000474617 NSD1Q96L73 2696 aaPredicted RBP15.76■□□□□ 0.11
CCM2-206ENST00000474617 TSHBP01222 138 aa15.76■□□□□ 0.11
CCM2-206ENST00000474617 GTSCR1Q86UQ5 136 aa15.76■□□□□ 0.11
CCM2-206ENST00000474617 C20orf203Q8NBC4 194 aa15.76■□□□□ 0.11
CCM2-206ENST00000474617 NEGR1Q7Z3B1 354 aa15.75■□□□□ 0.11
CCM2-206ENST00000474617 HIGD1BQ9P298 99 aa15.75■□□□□ 0.11
CCM2-206ENST00000474617 PYGO1Q9Y3Y4 419 aa15.75■□□□□ 0.11
CCM2-206ENST00000474617 SETXQ7Z333 2677 aaKnown RBP15.74■□□□□ 0.11
CCM2-206ENST00000474617 SETD2Q9BYW2 2564 aaPredicted RBP15.74■□□□□ 0.11
CCM2-206ENST00000474617 TRBV10-1A0A0K0K1A3 114 aa15.74■□□□□ 0.11
CCM2-206ENST00000474617 PRSS29PA6NIE9 313 aa15.74■□□□□ 0.11
CCM2-206ENST00000474617 NMUP48645 174 aa15.74■□□□□ 0.11
CCM2-206ENST00000474617 AZU1P20160 251 aa15.73■□□□□ 0.11
CCM2-206ENST00000474617 HINT1P49773 126 aaPredicted RBP15.73■□□□□ 0.11
CCM2-206ENST00000474617 C2orf91Q6ZV80 131 aa15.73■□□□□ 0.11
CCM2-206ENST00000474617 CITED1Q99966 193 aa15.73■□□□□ 0.11
CCM2-206ENST00000474617 MRPL16Q9NX20 251 aaKnown RBP15.73■□□□□ 0.11
CCM2-206ENST00000474617 TRAV4A0A0B4J268 109 aa15.73■□□□□ 0.11
CCM2-206ENST00000474617 GIG44P09565 113 aaPredicted RBP15.73■□□□□ 0.11
CCM2-206ENST00000474617 OR4C5Q8NGB2 326 aa15.73■□□□□ 0.11
CCM2-206ENST00000474617 SEC11AP67812 179 aa15.72■□□□□ 0.11
CCM2-206ENST00000474617 HSD52Q0P140 79 aa15.72■□□□□ 0.11
CCM2-206ENST00000474617 IGHV3OR16-12A0A075B7B8 117 aa15.71■□□□□ 0.11
CCM2-206ENST00000474617 MPV17L2Q567V2 206 aa15.71■□□□□ 0.11
CCM2-206ENST00000474617 BVES-AS1Q5T3Y7 98 aa15.71■□□□□ 0.11
CCM2-206ENST00000474617 CSNK1G2-AS1Q8NCQ2 148 aa15.71■□□□□ 0.11
CCM2-206ENST00000474617 CST9LQ9H4G1 147 aa15.71■□□□□ 0.11
CCM2-206ENST00000474617 TRGV1A0A0A0MS02 117 aa15.7■□□□□ 0.1
CCM2-206ENST00000474617 HERVK_113P61574 105 aa15.7■□□□□ 0.1
CCM2-206ENST00000474617 RRN3P1Q2M238 152 aa15.7■□□□□ 0.1
CCM2-206ENST00000474617 OVOL2Q9BRP0 275 aa15.7■□□□□ 0.1
CCM2-206ENST00000474617 P0DMU3 169 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 FAM231AP0DMU4 169 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 FAM231CP0DMU5 169 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 SPANXA1Q9NS26 97 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 IGHV3-73A0A0B4J1V6 119 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 E9PLD3 99 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 PRM2P04554 102 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 RPL35AP18077 110 aaKnown RBP15.68■□□□□ 0.1
CCM2-206ENST00000474617 RPL39P62891 51 aaKnown RBP15.68■□□□□ 0.1
CCM2-206ENST00000474617 OR11H2Q8NH07 326 aa15.68■□□□□ 0.1
CCM2-206ENST00000474617 C2CD3Q4AC94 2353 aa15.67■□□□□ 0.1
CCM2-206ENST00000474617 SMAGPQ0VAQ4 97 aa15.67■□□□□ 0.1
CCM2-206ENST00000474617 PCP2Q8IVA1 136 aa15.67■□□□□ 0.1
CCM2-206ENST00000474617 CUBNO60494 3623 aa15.66■□□□□ 0.1
CCM2-206ENST00000474617 SMIM9A6NGZ8 99 aa15.66■□□□□ 0.1
CCM2-206ENST00000474617 COTL1Q14019 142 aa15.66■□□□□ 0.1
CCM2-206ENST00000474617 NFE4Q86UQ8 179 aa15.66■□□□□ 0.1
CCM2-206ENST00000474617 C11orf86A6NJI1 115 aa15.65■□□□□ 0.1
CCM2-206ENST00000474617 RPL36AP83881 106 aaKnown RBP15.65■□□□□ 0.1
CCM2-206ENST00000474617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.65■□□□□ 0.1
CCM2-206ENST00000474617 RPL36ALQ969Q0 106 aaKnown RBP15.65■□□□□ 0.1
CCM2-206ENST00000474617 NACAE9PAV3 2078 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 IGKV2D-26A0A0A0MRZ7 120 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 A6NDN8 102 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 GAGE1Q13065 139 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 TAL2Q16559 108 aa15.64■□□□□ 0.09
CCM2-206ENST00000474617 DAZ4Q86SG3 579 aaKnown RBP15.64■□□□□ 0.09
CCM2-206ENST00000474617 ORAOV1Q8WV07 137 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms