RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 FOXI2Q6ZQN5 318 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 RPS19BP1Q86WX3 136 aaKnown RBP0.77□□□□□ -2.29
SSB-210ENST00000474273 CTAGE3PQ8IX95 158 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 TMEM254Q8TBM7 123 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 C2orf88Q9BSF0 95 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 REG4Q9BYZ8 158 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 LINC00470Q9BZP3 86 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 CALML5Q9NZT1 146 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 TNRC6BQ9UPQ9 1833 aaKnown RBP0.77□□□□□ -2.29
SSB-210ENST00000474273 PLXNA2O75051 1894 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 TNRC6AQ8NDV7 1962 aaKnown RBP0.77□□□□□ -2.29
SSB-210ENST00000474273 ARFGEF3Q5TH69 2177 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 CACNA1BQ00975 2339 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
SSB-210ENST00000474273 CNOT1A5YKK6 2376 aaKnown RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 ZDBF2Q9HCK1 2354 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 DNAJC13O75165 2243 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 TRGV2A0A075B6R0 118 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 TRAV14DV4A0A0A6YYC5 116 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 FAM92AA1XBS5 289 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 ZNF736B4DX44 427 aaPredicted RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 ERC2-IT1O76042 136 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 PIRTP0C851 137 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 SAA1P0DJI8 122 aaPredicted RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 OR5AS1Q8N127 324 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 DEFB124Q8NES8 71 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 C1orf54Q8WWF1 131 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 LINC00052Q96N35 136 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 LIMD2Q9BT23 127 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 SNRNP25Q9BV90 132 aaKnown RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 CST11Q9H112 138 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 SLC35B3Q9H1N7 401 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 METTL1Q9UBP6 276 aaKnown RBP0.76□□□□□ -2.29
SSB-210ENST00000474273 CACNA1EQ15878 2313 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 PCNX1Q96RV3 2341 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 ALPK2Q86TB3 2170 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 ESPL1Q14674 2120 aa0.76□□□□□ -2.29
SSB-210ENST00000474273 TSC2P49815 1807 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 KIAA1549LQ6ZVL6 1849 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 RIF1Q5UIP0 2472 aaKnown RBP0.75□□□□□ -2.29
SSB-210ENST00000474273 AHCTF1Q8WYP5 2266 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 MED12Q93074 2177 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 LOC107984156A0A0G2JMH3 177 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 C3orf85A0A1B0GTC6 90 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 LOC107986453A0A1B0GWG9 222 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 K7ERU9 68 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 CCL22O00626 93 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 CDC42EP2O14613 210 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 LYRM1O43325 122 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 SULT1C4O75897 302 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 NCR2O95944 276 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 TNFP01375 233 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 TRACP01848 142 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 PCBD1P61457 104 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 COPZ1P61923 177 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 DEFB133Q30KQ1 61 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 NCBP2-AS2Q69YL0 99 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.75□□□□□ -2.29
SSB-210ENST00000474273 ARL17AQ8IVW1 177 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 OR10AC1Q8NH08 325 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 OR5AK2Q8NH90 309 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 MAGOHBQ96A72 148 aaKnown RBP0.75□□□□□ -2.29
SSB-210ENST00000474273 MPC1Q9Y5U8 109 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 EXPH5Q8NEV8 1989 aa0.75□□□□□ -2.29
SSB-210ENST00000474273 EP300Q09472 2414 aaPredicted RBP0.75□□□□□ -2.29
SSB-210ENST00000474273 SPTBN2O15020 2390 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 TPRP12270 2363 aaKnown RBP0.74□□□□□ -2.29
SSB-210ENST00000474273 TRBV20-1A0A075B6N2 111 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 SPTY2D1-AS1A0A0U1RR47 76 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 LOC285095A0A1B0GVY8 99 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 TRBV6-4A0A1B0GX49 114 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 CCDC179H3BU77 68 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 EDF1O60869 148 aaKnown RBP0.74□□□□□ -2.29
SSB-210ENST00000474273 SMIM24O75264 130 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 STATHP02808 62 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 SPINT3P49223 89 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 GNG11P61952 73 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 PLGLB1Q02325 96 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 EMX2Q04743 252 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 CIRBPQ14011 172 aaKnown RBP0.74□□□□□ -2.29
SSB-210ENST00000474273 MIC13Q5XKP0 118 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 TEX261Q6UWH6 196 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 GKN2Q86XP6 184 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 C10orf111Q8N326 155 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 ARL11Q969Q4 196 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 DPH3Q96FX2 82 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 CDC42SE1Q9NRR8 79 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 PAIP2BQ9ULR5 123 aaKnown RBP0.74□□□□□ -2.29
SSB-210ENST00000474273 CACNA1CQ13936 2221 aa0.74□□□□□ -2.29
SSB-210ENST00000474273 INTS1Q8N201 2190 aaKnown RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 GOLGB1Q14789 3259 aaKnown RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 DOCK11Q5JSL3 2073 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 CACNA1HO95180 2353 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 IGHV1-24A0A0C4DH33 117 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 MIF4GDA9UHW6 222 aaKnown RBP0.73□□□□□ -2.29
SSB-210ENST00000474273 M0R2P5 195 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 CCL25O15444 150 aa0.73□□□□□ -2.29
SSB-210ENST00000474273 MRPS14O60783 128 aaKnown RBP0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms