RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
APP-215ENST00000474136 YPEL4Q96NS1 127 aa13.84□□□□□ -0.19
APP-215ENST00000474136 SPINK4O60575 86 aa13.83□□□□□ -0.2
APP-215ENST00000474136 MRPL54Q6P161 138 aaKnown RBP13.83□□□□□ -0.2
APP-215ENST00000474136 SRRM2Q9UQ35 2752 aaKnown RBP13.83□□□□□ -0.2
APP-215ENST00000474136 A0A1B0GXF2 115 aa13.82□□□□□ -0.2
APP-215ENST00000474136 A8MWV9 139 aa13.82□□□□□ -0.2
APP-215ENST00000474136 DMRTA1Q5VZB9 504 aa13.82□□□□□ -0.2
APP-215ENST00000474136 AP1S3Q96PC3 154 aa13.82□□□□□ -0.2
APP-215ENST00000474136 TGIF2-C20orf24A0A0A6YYL0 155 aa13.81□□□□□ -0.2
APP-215ENST00000474136 CIDEAO60543 219 aa13.81□□□□□ -0.2
APP-215ENST00000474136 MT-ND6P03923 174 aa13.81□□□□□ -0.2
APP-215ENST00000474136 LINC00612Q8N6U2 182 aa13.81□□□□□ -0.2
APP-215ENST00000474136 TNFRSF18Q9Y5U5 241 aa13.81□□□□□ -0.2
APP-215ENST00000474136 GAGE12BA1L429 117 aa13.8□□□□□ -0.2
APP-215ENST00000474136 GAGE7O76087 117 aa13.8□□□□□ -0.2
APP-215ENST00000474136 GAGE12FP0CL80 117 aa13.8□□□□□ -0.2
APP-215ENST00000474136 GAGE12GP0CL81 117 aa13.8□□□□□ -0.2
APP-215ENST00000474136 GAGE12IP0CL82 117 aa13.8□□□□□ -0.2
APP-215ENST00000474136 SMIM17P0DL12 118 aa13.8□□□□□ -0.2
APP-215ENST00000474136 CAMPP49913 170 aa13.8□□□□□ -0.2
APP-215ENST00000474136 SSTP61278 116 aa13.8□□□□□ -0.2
APP-215ENST00000474136 GNB1LQ9BYB4 327 aa13.8□□□□□ -0.2
APP-215ENST00000474136 TMEM191AQ9H0A3 160 aa13.8□□□□□ -0.2
APP-215ENST00000474136 TRGV1A0A0A0MS02 117 aa13.79□□□□□ -0.2
APP-215ENST00000474136 MUC21A0A0G2JKD1 596 aa13.79□□□□□ -0.2
APP-215ENST00000474136 MUC21A0A140T8X8 626 aa13.79□□□□□ -0.2
APP-215ENST00000474136 COLCA2A8K830 154 aa13.79□□□□□ -0.2
APP-215ENST00000474136 CDPF1Q6NVV7 123 aa13.79□□□□□ -0.2
APP-215ENST00000474136 GATD1Q8NB37 220 aa13.79□□□□□ -0.2
APP-215ENST00000474136 EREGO14944 169 aa13.78□□□□□ -0.2
APP-215ENST00000474136 HLA-DQA1P01909 254 aa13.78□□□□□ -0.2
APP-215ENST00000474136 DNAH10OSP0CZ25 163 aa13.78□□□□□ -0.2
APP-215ENST00000474136 HAMPP81172 84 aa13.78□□□□□ -0.2
APP-215ENST00000474136 MSRB1Q9NZV6 116 aa13.78□□□□□ -0.2
APP-215ENST00000474136 RAB4BP61018 213 aa13.77□□□□□ -0.21
APP-215ENST00000474136 DPH3P1Q9H4G8 78 aa13.77□□□□□ -0.21
APP-215ENST00000474136 MRPL16Q9NX20 251 aaKnown RBP13.77□□□□□ -0.21
APP-215ENST00000474136 TRGV2A0A075B6R0 118 aa13.76□□□□□ -0.21
APP-215ENST00000474136 A0A096LPF7 62 aa13.76□□□□□ -0.21
APP-215ENST00000474136 H3BNG1 76 aa13.76□□□□□ -0.21
APP-215ENST00000474136 RHODO00212 210 aa13.76□□□□□ -0.21
APP-215ENST00000474136 RAB5AP20339 215 aa13.76□□□□□ -0.21
APP-215ENST00000474136 Q6ZTI0 123 aa13.76□□□□□ -0.21
APP-215ENST00000474136 VSIG2Q96IQ7 327 aa13.76□□□□□ -0.21
APP-215ENST00000474136 ZFP2Q6ZN57 461 aa13.75□□□□□ -0.21
APP-215ENST00000474136 TRAV4A0A0B4J268 109 aa13.74□□□□□ -0.21
APP-215ENST00000474136 SIVA1O15304 175 aa13.74□□□□□ -0.21
APP-215ENST00000474136 RS1O15537 224 aa13.74□□□□□ -0.21
APP-215ENST00000474136 EVI2AP22794 236 aa13.74□□□□□ -0.21
APP-215ENST00000474136 TMEM136Q6ZRR5 245 aa13.74□□□□□ -0.21
APP-215ENST00000474136 OR4C5Q8NGB2 326 aa13.74□□□□□ -0.21
APP-215ENST00000474136 A0A087WTM6 91 aa13.73□□□□□ -0.21
APP-215ENST00000474136 J3QL48 77 aa13.73□□□□□ -0.21
APP-215ENST00000474136 RPS10P46783 165 aaKnown RBP13.73□□□□□ -0.21
APP-215ENST00000474136 FAM104BQ5XKR9 115 aa13.73□□□□□ -0.21
APP-215ENST00000474136 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
APP-215ENST00000474136 TRAPPC1Q9Y5R8 145 aa13.73□□□□□ -0.21
APP-215ENST00000474136 CRYGDP07320 174 aa13.72□□□□□ -0.21
APP-215ENST00000474136 CFAP126Q5VTH2 177 aa13.72□□□□□ -0.21
APP-215ENST00000474136 APCSP02743 223 aa13.71□□□□□ -0.21
APP-215ENST00000474136 PPBPP02775 128 aa13.71□□□□□ -0.21
APP-215ENST00000474136 KIF25-AS1Q9Y6Z4 181 aa13.71□□□□□ -0.21
APP-215ENST00000474136 FAM229AH3BQW9 127 aa13.7□□□□□ -0.22
APP-215ENST00000474136 FAM74A4Q5TZK3 123 aa13.7□□□□□ -0.22
APP-215ENST00000474136 Q6ZSN1 163 aa13.7□□□□□ -0.22
APP-215ENST00000474136 MRAP2Q96G30 205 aa13.7□□□□□ -0.22
APP-215ENST00000474136 JPT2Q9H910 190 aa13.7□□□□□ -0.22
APP-215ENST00000474136 A0A087WWL8 130 aa13.69□□□□□ -0.22
APP-215ENST00000474136 RAB4AP20338 218 aa13.69□□□□□ -0.22
APP-215ENST00000474136 MRPL18Q9H0U6 180 aaKnown RBP13.69□□□□□ -0.22
APP-215ENST00000474136 F5H697 171 aa13.68□□□□□ -0.22
APP-215ENST00000474136 H7C1H1 209 aa13.68□□□□□ -0.22
APP-215ENST00000474136 PPP1R17O96001 155 aa13.68□□□□□ -0.22
APP-215ENST00000474136 GCSHP23434 173 aa13.68□□□□□ -0.22
APP-215ENST00000474136 FABP9Q0Z7S8 132 aa13.68□□□□□ -0.22
APP-215ENST00000474136 SLAQ13239 276 aa13.68□□□□□ -0.22
APP-215ENST00000474136 AMN1Q8IY45 258 aa13.68□□□□□ -0.22
APP-215ENST00000474136 MGPP08493 103 aa13.67□□□□□ -0.22
APP-215ENST00000474136 ZNF56Q15929 161 aa13.67□□□□□ -0.22
APP-215ENST00000474136 UFSP1Q6NVU6 142 aa13.67□□□□□ -0.22
APP-215ENST00000474136 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
APP-215ENST00000474136 SAMD10Q9BYL1 202 aa13.67□□□□□ -0.22
APP-215ENST00000474136 UBR4Q5T4S7 5183 aa13.67□□□□□ -0.22
APP-215ENST00000474136 CKS2P33552 79 aa13.66□□□□□ -0.22
APP-215ENST00000474136 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
APP-215ENST00000474136 TRGV4A0A0C4DH28 118 aa13.65□□□□□ -0.22
APP-215ENST00000474136 IGHV3-53P01767 116 aa13.65□□□□□ -0.22
APP-215ENST00000474136 MRPL51Q4U2R6 128 aaKnown RBP13.65□□□□□ -0.22
APP-215ENST00000474136 NFE4Q86UQ8 179 aa13.65□□□□□ -0.22
APP-215ENST00000474136 ORMDL3Q8N138 153 aa13.65□□□□□ -0.22
APP-215ENST00000474136 ZNF479Q96JC4 524 aa13.65□□□□□ -0.22
APP-215ENST00000474136 LAMTOR2Q9Y2Q5 125 aa13.65□□□□□ -0.22
APP-215ENST00000474136 DNAH8Q96JB1 4490 aa13.65□□□□□ -0.23
APP-215ENST00000474136 HMCN2Q8NDA2 5059 aa13.64□□□□□ -0.23
APP-215ENST00000474136 TRBV6-4A0A1B0GX49 114 aa13.64□□□□□ -0.23
APP-215ENST00000474136 TRGC2P03986 189 aa13.64□□□□□ -0.23
APP-215ENST00000474136 PHOX2AO14813 284 aa13.63□□□□□ -0.23
APP-215ENST00000474136 ICOSQ9Y6W8 199 aa13.63□□□□□ -0.23
APP-215ENST00000474136 IGHV3-73A0A0B4J1V6 119 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 311.1 ms