RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 WFDC10BQ8IUB3 73 aa8.5□□□□□ -1.05
DDX56-209ENST00000473924 DNAJC30Q96LL9 226 aa8.5□□□□□ -1.05
DDX56-209ENST00000473924 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
DDX56-209ENST00000473924 Q6ZR54 194 aa8.49□□□□□ -1.05
DDX56-209ENST00000473924 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
DDX56-209ENST00000473924 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
DDX56-209ENST00000473924 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 TRAV26-2A0A0B4J265 109 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 IGHV3-38A0A0C4DH36 116 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 A0A1B0GW15 77 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 CAMPP49913 170 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 DAZ4Q86SG3 579 aaKnown RBP8.48□□□□□ -1.05
DDX56-209ENST00000473924 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 DAZ3Q9NR90 486 aaKnown RBP8.48□□□□□ -1.05
DDX56-209ENST00000473924 RYR3Q15413 4870 aa8.48□□□□□ -1.05
DDX56-209ENST00000473924 RYR2Q92736 4967 aa8.47□□□□□ -1.05
DDX56-209ENST00000473924 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
DDX56-209ENST00000473924 S100A8P05109 93 aa8.47□□□□□ -1.05
DDX56-209ENST00000473924 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
DDX56-209ENST00000473924 MRPL54Q6P161 138 aaKnown RBP8.47□□□□□ -1.05
DDX56-209ENST00000473924 DNAH10OSP0CZ25 163 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 HBBP68871 147 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 AMN1Q8IY45 258 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 C6orf223Q8N319 242 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 FRZBQ92765 325 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 CTDSP1Q9GZU7 261 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 VPS13DQ5THJ4 4388 aa8.46□□□□□ -1.06
DDX56-209ENST00000473924 HYDINQ4G0P3 5121 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 TRBV6-8A0A0A6YYG3 113 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 K7EP13 123 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 RAB4AP20338 218 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 C10orf91Q5T1B1 145 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 KCNIP4Q6PIL6 250 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
DDX56-209ENST00000473924 MRAP2Q96G30 205 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 KRTAP1-5Q9BYS1 174 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 CARHSP1Q9Y2V2 147 aaKnown RBP8.45□□□□□ -1.06
DDX56-209ENST00000473924 URGCP-MRPS24S4R325 110 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 KMT2AQ03164 3969 aa8.45□□□□□ -1.06
DDX56-209ENST00000473924 NDUFA5Q16718 116 aa8.44□□□□□ -1.06
DDX56-209ENST00000473924 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
DDX56-209ENST00000473924 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
DDX56-209ENST00000473924 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
DDX56-209ENST00000473924 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
DDX56-209ENST00000473924 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 FAM104BQ5XKR9 115 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 BTF3L4Q96K17 158 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 IMMP2LQ96T52 175 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
DDX56-209ENST00000473924 TRBV25-1A0A075B6N4 114 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 A0A087WX48 190 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 IGHV1-24A0A0C4DH33 117 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 C7orf77A4D0Y5 90 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 TMEM262E9PQX1 116 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 SMKR1H3BMG3 65 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 RTL8CO15255 209 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 NCR2O95944 276 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 APOC3P02656 99 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 BTF3P20290 206 aaKnown RBP8.42□□□□□ -1.06
DDX56-209ENST00000473924 S100PP25815 95 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 COTL1Q14019 142 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 RHEBQ15382 184 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 NIT1Q86X76 327 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 CLRN3Q8NCR9 226 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 DEFB104AQ8WTQ1 72 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 RPS10P5Q9NQ39 176 aa8.42□□□□□ -1.06
DDX56-209ENST00000473924 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
DDX56-209ENST00000473924 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
DDX56-209ENST00000473924 PPP1R17O96001 155 aa8.41□□□□□ -1.06
DDX56-209ENST00000473924 CKS2P33552 79 aa8.41□□□□□ -1.06
DDX56-209ENST00000473924 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
DDX56-209ENST00000473924 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 PRSS29PA6NIE9 313 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 PMCHP20382 165 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 RPS10P46783 165 aaKnown RBP8.4□□□□□ -1.06
DDX56-209ENST00000473924 PKIAP61925 76 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 SVBPQ8N300 66 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 Q8N3U1 123 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 TMEM242Q9NWH2 141 aa8.4□□□□□ -1.06
DDX56-209ENST00000473924 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 SNAPINO95295 136 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 AMTP48728 403 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 ELOBQ15370 118 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
DDX56-209ENST00000473924 TRAV9-1A0A075B6T8 112 aa8.38□□□□□ -1.07
DDX56-209ENST00000473924 D6R8Y8 96 aa8.38□□□□□ -1.07
DDX56-209ENST00000473924 I3L3M4 83 aa8.38□□□□□ -1.07
DDX56-209ENST00000473924 UBE2L6O14933 153 aa8.38□□□□□ -1.07
DDX56-209ENST00000473924 PPBPP02775 128 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms