RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 LHFPL6Q9Y693 200 aa2.57□□□□□ -2
SCFD1-205ENST00000469043 MKI67P46013 3256 aaKnown RBP2.57□□□□□ -2
SCFD1-205ENST00000469043 F5P12259 2224 aa2.57□□□□□ -2
SCFD1-205ENST00000469043 NCOR1O75376 2440 aa2.57□□□□□ -2
SCFD1-205ENST00000469043 C3orf85A0A1B0GTC6 90 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 APOC4-APOC2K7ER74 178 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 APOC2P02655 101 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 Q56UQ5 140 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 ARPINQ7Z6K5 226 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 FAM19A2Q8N3H0 131 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 Q96M85 177 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 RPRMQ9NS64 109 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 TAS2R8Q9NYW2 309 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 CCL26Q9Y258 94 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 NOP16Q9Y3C1 178 aaKnown RBP2.56□□□□□ -2
SCFD1-205ENST00000469043 CHCHD2Q9Y6H1 151 aaPredicted RBP2.56□□□□□ -2
SCFD1-205ENST00000469043 GOLGA4Q13439 2230 aaKnown RBP2.56□□□□□ -2
SCFD1-205ENST00000469043 TRIOBPQ9H2D6 2365 aa2.56□□□□□ -2
SCFD1-205ENST00000469043 IGKV3D-11A0A0A0MRZ8 115 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 E7EUB6 86 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 GEMIN2O14893 280 aaKnown RBP2.55□□□□□ -2
SCFD1-205ENST00000469043 EDF1O60869 148 aaKnown RBP2.55□□□□□ -2
SCFD1-205ENST00000469043 SNRNP200O75643 2136 aaKnown RBP2.55□□□□□ -2
SCFD1-205ENST00000469043 DEFB113Q30KQ7 82 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 ATP11AUNQ6ZP68 121 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 DEFB106AQ8N104 65 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 ATP6V0E2Q8NHE4 81 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 SMIM7Q9BQ49 75 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 SERP1Q9Y6X1 66 aa2.55□□□□□ -2
SCFD1-205ENST00000469043 ZFHX2Q9C0A1 2572 aaPredicted RBP2.55□□□□□ -2
SCFD1-205ENST00000469043 MCRIP1C9JLW8 97 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 HCRTO43612 131 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 S100A10P60903 97 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 RPL26P61254 145 aaKnown RBP2.54□□□□□ -2
SCFD1-205ENST00000469043 C9orf153Q5TBE3 101 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 Q6ZTI0 123 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 C9orf163Q8N9P6 203 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 RTTNQ86VV8 2226 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 PCNX2A6NKB5 2137 aa2.54□□□□□ -2
SCFD1-205ENST00000469043 TRANK1O15050 2925 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 FREM1Q5H8C1 2179 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 A0A087WSZ3 146 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 TRAV10A0A0B4J240 114 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 CXorf51AA0A1B0GTR3 108 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 TCRBV4S1A1TA0A5B7 111 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 LRCOL1A6NCL2 159 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 J3QLW9 94 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 ERC2-IT1O76042 136 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 SPINK8P0C7L1 97 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 DEFB103AP81534 67 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 NCBP2-AS2Q69YL0 99 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 CASC2Q6XLA1 102 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 SVBPQ8N300 66 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 VSTM2AQ8TAG5 236 aa2.53□□□□□ -2
SCFD1-205ENST00000469043 LSM10Q969L4 123 aaKnown RBP2.53□□□□□ -2
SCFD1-205ENST00000469043 KNL1Q8NG31 2342 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 LAMA2P24043 3122 aaKnown RBP2.52□□□□□ -2.01
SCFD1-205ENST00000469043 SPAG17Q6Q759 2223 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 TRAV12-1A0A0B4J245 112 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 IFITM1P13164 125 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 HMGA1P17096 107 aaKnown RBP2.52□□□□□ -2.01
SCFD1-205ENST00000469043 COL5A1-AS1Q5SY13 56 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 OR2T2Q6IF00 324 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 CLECL1Q8IZS7 167 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 SFT2D1Q8WV19 159 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 SNHG12Q9BXW3 62 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 TNRC6AQ8NDV7 1962 aaKnown RBP2.52□□□□□ -2.01
SCFD1-205ENST00000469043 CHD7Q9P2D1 2997 aa2.52□□□□□ -2.01
SCFD1-205ENST00000469043 RANBP2P49792 3224 aaKnown RBP2.51□□□□□ -2.01
SCFD1-205ENST00000469043 PI4KAP42356 2102 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 IL5P05113 134 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 LINC00315P59091 139 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 Q6AWC8 147 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 C2orf82Q6UX34 121 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 C5orf17Q8NAS9 161 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 PLPP5Q8NEB5 264 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 LINC00526Q96FQ7 95 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 LAMA3Q16787 3333 aa2.51□□□□□ -2.01
SCFD1-205ENST00000469043 C2orf70A6NJV1 201 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 E7EQL1 145 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 IGLV6-57P01721 117 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 Q6ZS92 163 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 SLC25A26Q70HW3 274 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 TTC9CQ8N5M4 171 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 Q8TAT8 98 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 SPTSSAQ969W0 71 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 TIMM21Q9BVV7 248 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 MUC22E2RYF6 1773 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-205ENST00000469043 CDH23Q9H251 3354 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 CACNA1EQ15878 2313 aa2.5□□□□□ -2.01
SCFD1-205ENST00000469043 UNC13CQ8NB66 2214 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 CHD9Q3L8U1 2897 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 A0A1W2PRS3 328 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 OOSP1A8MZH6 123 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 MPC2O95563 127 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 P0C880 135 aa2.49□□□□□ -2.01
SCFD1-205ENST00000469043 ADCYAP1P18509 176 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms