RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 RBBP6Q7Z6E9 1792 aaKnown RBP0.7□□□□□ -2.3
PRPF40A-205ENST00000467114 IFT140Q96RY7 1462 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 GVQW2A0A096LPI5 108 aaPredicted RBP0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 APOC4-APOC2K7ER74 178 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 AKAIN1P0CW23 69 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 Q56UQ5 140 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 C12orf73Q69YU5 71 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 Q6AWC8 147 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 PRR15LQ9BU68 103 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 PHLPP1O60346 1717 aa0.69□□□□□ -2.3
PRPF40A-205ENST00000467114 FOCADQ5VW36 1801 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 MYH7P12883 1935 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 TRGV1A0A0A0MS02 117 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 HCG22E2RYF7 251 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 DLEU1O43261 78 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 ACYP2P14621 99 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 Q8N8P6 123 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 SMIM11BQ8TCY0 68 aa0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 MAP2P11137 1827 aaKnown RBP0.68□□□□□ -2.3
PRPF40A-205ENST00000467114 MBD5Q9P267 1494 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 PARP14Q460N5 1801 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 SIX6O95475 246 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 INSL4Q14641 139 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 PP6455Q8WZ26 134 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 PLAC8Q9NZF1 115 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 SCP2D1Q9UJQ7 156 aa0.67□□□□□ -2.3
PRPF40A-205ENST00000467114 F5P12259 2224 aa0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 CDK13Q14004 1512 aaKnown RBP0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 TRAV13-2A0A0B4J235 113 aa0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 MIF4GDA9UHW6 222 aaKnown RBP0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 APOC2P02655 101 aa0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 WFDC6Q9BQY6 131 aa0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 SCN3BQ9NY72 215 aa0.66□□□□□ -2.3
PRPF40A-205ENST00000467114 CASKIN1Q8WXD9 1431 aa0.65□□□□□ -2.3
PRPF40A-205ENST00000467114 SPAARA0A1B0GVQ0 90 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 SMIM6P0DI80 62 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 CATR1Q13166 79 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 VMO1Q7Z5L0 202 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 PPP3R2Q96LZ3 170 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 AQP10Q96PS8 301 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 ARFGEF1Q9Y6D6 1849 aa0.65□□□□□ -2.31
PRPF40A-205ENST00000467114 KDM6BO15054 1643 aa0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 TNS1Q9HBL0 1735 aaKnown RBP0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 TMEM14DPA8MWL7 114 aa0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 C10orf128Q5T292 105 aa0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 Q6ZRX8 168 aa0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 DOCK11Q5JSL3 2073 aa0.64□□□□□ -2.31
PRPF40A-205ENST00000467114 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 SNAPC5O75971 98 aa0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 IFNGP01579 166 aa0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 C2orf88Q9BSF0 95 aa0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 MEGF8Q7Z7M0 2845 aa0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 JMJD1CQ15652 2540 aa0.63□□□□□ -2.31
PRPF40A-205ENST00000467114 APCP25054 2843 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 TRAV1-2A0A0B4J238 106 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 PPP1R17O96001 155 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 GCHFRP30047 84 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 TTC9CQ8N5M4 171 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 SSC5DA1L4H1 1573 aa0.62□□□□□ -2.31
PRPF40A-205ENST00000467114 BCL9LQ86UU0 1499 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 LINC00587B1AMM8 73 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 PRH1P02810 166 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 MRPL54Q6P161 138 aaKnown RBP0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 BAGE3Q86Y29 109 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 C8orf59Q8N0T1 100 aaPredicted RBP0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 PROK2Q9HC23 129 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 NWD2Q9ULI1 1742 aa0.61□□□□□ -2.31
PRPF40A-205ENST00000467114 KTN1Q86UP2 1357 aaKnown RBP0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 F6UZH7 168 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 TNFP01375 233 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 NMBP08949 121 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 TPPP2P59282 170 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 TMEM203Q969S6 136 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 SPANXDQ9BXN6 97 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 GNG8Q9UK08 70 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 LRRC37A3O60309 1634 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 MYO7AQ13402 2215 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 NAV3Q8IVL0 2385 aa0.6□□□□□ -2.31
PRPF40A-205ENST00000467114 ZMYM4Q5VZL5 1548 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 ARAP2Q8WZ64 1704 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 OOSP1A8MZH6 123 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 CORTO00230 105 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 CCL18P55774 89 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 C9orf153Q5TBE3 101 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 Q5VV11 94 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 R4GMQ9 66 aa0.59□□□□□ -2.31
PRPF40A-205ENST00000467114 A2ML1A8K2U0 1454 aa0.59□□□□□ -2.32
PRPF40A-205ENST00000467114 NALCNQ8IZF0 1738 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 PPIP5K1Q6PFW1 1433 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 SMG6Q86US8 1419 aaKnown RBP0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 S100A1P23297 94 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 C5orf38Q86SI9 138 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 SMR3AQ99954 134 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 CYP4F30PQ9H0H9 118 aa0.58□□□□□ -2.32
PRPF40A-205ENST00000467114 CADP27708 2225 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 CPSF1Q10570 1443 aaKnown RBP0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 SSSCA1O60232 199 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 KRTAP2-3P0C7H8 128 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 GNG4P50150 75 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms