RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 GAGE12JA6NER3 117 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 RAB4AP20338 218 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 GAGE1Q13065 139 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 GAGE4Q13068 117 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 GAGE5Q13069 117 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 RNF185Q96GF1 192 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 Q9UF83 564 aa11.06□□□□□ -0.64
GPC1-207ENST00000466624 LCE6AA0A183 80 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 UBE2D3P61077 147 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 UBE2D2P62837 147 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 ESRGQ1W209 222 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 ATP6V0E2Q8NHE4 81 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 ZNRF2Q8NHG8 242 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 NIT2Q9NQR4 276 aa11.05□□□□□ -0.64
GPC1-207ENST00000466624 SACSQ9NZJ4 4579 aa11.04□□□□□ -0.64
GPC1-207ENST00000466624 LYPD5Q6UWN5 251 aa11.04□□□□□ -0.64
GPC1-207ENST00000466624 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
GPC1-207ENST00000466624 LINC00588Q9Y4M8 146 aa11.04□□□□□ -0.64
GPC1-207ENST00000466624 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 URGCP-MRPS24S4R325 110 aa11.03□□□□□ -0.64
GPC1-207ENST00000466624 LY6G6CO95867 125 aa11.02□□□□□ -0.65
GPC1-207ENST00000466624 COX19Q49B96 90 aa11.02□□□□□ -0.65
GPC1-207ENST00000466624 ATRAIDQ6UW56 229 aa11.02□□□□□ -0.65
GPC1-207ENST00000466624 DAZ4Q86SG3 579 aaKnown RBP11.02□□□□□ -0.65
GPC1-207ENST00000466624 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
GPC1-207ENST00000466624 DAZ3Q9NR90 486 aaKnown RBP11.02□□□□□ -0.65
GPC1-207ENST00000466624 KMT2CQ8NEZ4 4911 aaKnown RBP11.01□□□□□ -0.65
GPC1-207ENST00000466624 TRBV6-5A0A0K0K1A5 114 aa11.01□□□□□ -0.65
GPC1-207ENST00000466624 PPP1R17O96001 155 aa11.01□□□□□ -0.65
GPC1-207ENST00000466624 MRPL51Q4U2R6 128 aaKnown RBP11.01□□□□□ -0.65
GPC1-207ENST00000466624 PPBPP02775 128 aa11□□□□□ -0.65
GPC1-207ENST00000466624 ELOBQ15370 118 aa11□□□□□ -0.65
GPC1-207ENST00000466624 TMEM97Q5BJF2 176 aa11□□□□□ -0.65
GPC1-207ENST00000466624 LELP1Q5T871 98 aa11□□□□□ -0.65
GPC1-207ENST00000466624 TRBV24-1A0A075B6N3 115 aa10.99□□□□□ -0.65
GPC1-207ENST00000466624 OR10J3Q5JRS4 329 aa10.99□□□□□ -0.65
GPC1-207ENST00000466624 TMEM136Q6ZRR5 245 aa10.99□□□□□ -0.65
GPC1-207ENST00000466624 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
GPC1-207ENST00000466624 DNAH6Q9C0G6 4158 aa10.99□□□□□ -0.65
GPC1-207ENST00000466624 HLA-DQA1P01909 254 aa10.98□□□□□ -0.65
GPC1-207ENST00000466624 CKS2P33552 79 aa10.98□□□□□ -0.65
GPC1-207ENST00000466624 GNB1LQ9BYB4 327 aa10.98□□□□□ -0.65
GPC1-207ENST00000466624 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
GPC1-207ENST00000466624 PHOX2AO14813 284 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 NCR2O95944 276 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 MT-ND6P03923 174 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
GPC1-207ENST00000466624 NRACQ8N912 160 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 ST20Q9HBF5 79 aa10.97□□□□□ -0.65
GPC1-207ENST00000466624 TGIF2-C20orf24A0A0A6YYL0 155 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 SDHAF1A6NFY7 115 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 D6R8Y8 96 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 SMKR1H3BMG3 65 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 ORMDL3Q8N138 153 aa10.96□□□□□ -0.65
GPC1-207ENST00000466624 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 TRBV6-8A0A0A6YYG3 113 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 IGHV3-38A0A0C4DH36 116 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 POLR2KP53803 58 aaKnown RBP10.95□□□□□ -0.66
GPC1-207ENST00000466624 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 Q9H8V8 135 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 LAMTOR2Q9Y2Q5 125 aa10.95□□□□□ -0.66
GPC1-207ENST00000466624 RYR2Q92736 4967 aa10.94□□□□□ -0.66
GPC1-207ENST00000466624 SIVA1O15304 175 aa10.94□□□□□ -0.66
GPC1-207ENST00000466624 SUMO2P61956 95 aaKnown RBP10.94□□□□□ -0.66
GPC1-207ENST00000466624 RPL32P62910 135 aaKnown RBP10.94□□□□□ -0.66
GPC1-207ENST00000466624 CBLN2Q8IUK8 224 aa10.94□□□□□ -0.66
GPC1-207ENST00000466624 TMEM70Q9BUB7 260 aa10.94□□□□□ -0.66
GPC1-207ENST00000466624 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 APCSP02743 223 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 COTL1Q14019 142 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 NTM-AS1Q6ZSK4 140 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 WFDC10BQ8IUB3 73 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 PRELID3AQ96N28 172 aa10.93□□□□□ -0.66
GPC1-207ENST00000466624 TRBV25-1A0A075B6N4 114 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 I3L3M4 83 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 K7EP13 123 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 NPYP01303 97 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 DNAH10OSP0CZ25 163 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 S100A1P23297 94 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 IQCJQ1A5X6 159 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
GPC1-207ENST00000466624 IGHV1-24A0A0C4DH33 117 aa10.91□□□□□ -0.66
GPC1-207ENST00000466624 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
GPC1-207ENST00000466624 VCYO14598 125 aa10.91□□□□□ -0.66
GPC1-207ENST00000466624 LINC01556Q5JQF7 62 aa10.91□□□□□ -0.66
GPC1-207ENST00000466624 ATP6V1G1O75348 118 aa10.9□□□□□ -0.66
GPC1-207ENST00000466624 PMCHP20382 165 aa10.9□□□□□ -0.66
GPC1-207ENST00000466624 PKIAP61925 76 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms