RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 IGHV3-16A0A0C4DH30 117 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 IGHV4-61A0A0C4DH41 118 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 TMEM223A0PJW6 202 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 M0QY20 66 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 LYRM7Q5U5X0 104 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 C10orf99Q6UWK7 81 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 Q8N1Y9 231 aa8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 PRRC2AP48634 2157 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-203ENST00000462146 TRBV7-9A0A0J9YWB2 115 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 A0A0J9YXV3 536 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 MUSTN1Q8IVN3 82 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 TRBV20-1A0A075B6N2 111 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 C9JAW5 83 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 IGHV3-33P01772 117 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
PDZRN3-203ENST00000462146 PKD1L2Q7Z442 2459 aa8.68□□□□□ -1.02
PDZRN3-203ENST00000462146 TRBV6-5A0A0K0K1A5 114 aa8.68□□□□□ -1.02
PDZRN3-203ENST00000462146 SPINK13Q1W4C9 94 aa8.68□□□□□ -1.02
PDZRN3-203ENST00000462146 CSPG4Q6UVK1 2322 aa8.68□□□□□ -1.02
PDZRN3-203ENST00000462146 SLC25A20O43772 301 aa8.68□□□□□ -1.02
PDZRN3-203ENST00000462146 A6NDX4 124 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 LEPROTO15243 131 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 RHODO00212 210 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 IGLV1-40P01703 118 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 GATA3P23771 443 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 RNASE13Q5GAN3 156 aaKnown RBP8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 CEMP1Q6PRD7 247 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 BEX4Q9NWD9 120 aaPredicted RBP8.67□□□□□ -1.02
PDZRN3-203ENST00000462146 IGLV4-3A0A075B6K6 122 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 H3BUA1 57 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 ID1P41134 155 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 LY6DQ14210 128 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 RNF183Q96D59 192 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 ITPR1Q14643 2758 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 NACAE9PAV3 2078 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 USP24Q9UPU5 2620 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
PDZRN3-203ENST00000462146 TRAV8-3A0A0A6YYJ7 113 aa8.65□□□□□ -1.02
PDZRN3-203ENST00000462146 PROK1P58294 105 aa8.65□□□□□ -1.02
PDZRN3-203ENST00000462146 Q1RN00 199 aa8.65□□□□□ -1.02
PDZRN3-203ENST00000462146 SPXQ9BT56 116 aa8.65□□□□□ -1.02
PDZRN3-203ENST00000462146 ERG28Q9UKR5 140 aa8.65□□□□□ -1.02
PDZRN3-203ENST00000462146 A0A0J9YX75 114 aa8.65□□□□□ -1.03
PDZRN3-203ENST00000462146 PRM2P04554 102 aa8.65□□□□□ -1.03
PDZRN3-203ENST00000462146 CUBNO60494 3623 aa8.65□□□□□ -1.03
PDZRN3-203ENST00000462146 A0A0J9YXY3 114 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 A8MZ25 164 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 BRI3O95415 125 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 CFHR3Q02985 330 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 RHOHQ15669 191 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 Q6ZSV7 163 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 Q9UF83 564 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 HTN1P15515 57 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 NPC2P61916 151 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 DUX5Q96PT3 197 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 M0R2P5 195 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 AVPP01185 164 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 VCX2Q9H322 139 aa8.64□□□□□ -1.03
PDZRN3-203ENST00000462146 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 I3L3M4 83 aa8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 RBMY1A1P0DJD3 496 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 RBMY1CP0DJD4 496 aa8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 RBMY1FQ15415 496 aaKnown RBP8.63□□□□□ -1.03
PDZRN3-203ENST00000462146 K7EMT4 169 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 TRIAP1O43715 76 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 ADAMTSL4-AS1Q5T5F5 129 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 LITAFQ99732 161 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 TEX49A0A1B0GTD5 131 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 CRLF1O75462 422 aa8.62□□□□□ -1.03
PDZRN3-203ENST00000462146 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 KNCNA6PVL3 124 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 CD28P10747 220 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 PIMREGQ9BSJ6 248 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 K7EQG2 157 aa8.61□□□□□ -1.03
PDZRN3-203ENST00000462146 PRSS2P07478 247 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 PSMB8P28062 276 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 SVIPQ8NHG7 77 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 CITED1Q99966 193 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 SYNJ2BPP57105 145 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 ANAPC13Q9BS18 74 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 C10orf105Q8TEF2 133 aa8.6□□□□□ -1.03
PDZRN3-203ENST00000462146 UTP20O75691 2785 aaKnown RBP8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 ODF3Q96PU9 254 aa8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 EPG5Q9HCE0 2579 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms