RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 DEFB113Q30KQ7 82 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 KPRPQ5T749 579 aaPredicted RBP1.92□□□□□ -2.1
VPS8-215ENST00000460158 ZCCHC23Q6ZST2 131 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 CLECL1Q8IZS7 167 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 CYP4F30PQ9H0H9 118 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
VPS8-215ENST00000460158 ATP10BO94823 1461 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 PLA2R1Q13018 1463 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 RP1P56715 2156 aa1.92□□□□□ -2.1
VPS8-215ENST00000460158 EDC4Q6P2E9 1401 aaKnown RBP1.91□□□□□ -2.1
VPS8-215ENST00000460158 ABCA10Q8WWZ4 1543 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 ABCC2Q92887 1545 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 SIP14410 1827 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 TMSB15BA0A087X1C1 80 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 IGKV3D-11A0A0A0MRZ8 115 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 SYS1-DBNDD2H3BUS1 97 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 CCL16O15467 120 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 MOBPQ13875 183 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 ETDBQ3ZM63 59 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 LTBP2Q14767 1821 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 ARFGEF1Q9Y6D6 1849 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 RGPD1P0DJD0 1748 aa1.91□□□□□ -2.1
VPS8-215ENST00000460158 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.1
VPS8-215ENST00000460158 PTPRMP28827 1452 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 MLH3Q9UHC1 1453 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 ANKRD36A6QL64 1941 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 IGLV2-18A0A075B6J9 118 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 TRAV12-1A0A0B4J245 112 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 TRAV40A0A0B4J280 105 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 TMEM30CPA0ZSE6 113 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 ODF3BA8MYP8 253 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 HCG22E2RYF7 251 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 SMIM11AP58511 58 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 ZNF791Q3KP31 576 aaPredicted RBP1.9□□□□□ -2.11
VPS8-215ENST00000460158 SPATA45Q537H7 98 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 BVES-AS1Q5T3Y7 98 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 Q8TAT8 98 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 MANBALQ9NQG1 85 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 LINC00474Q9P2X8 69 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 LAMB4A4D0S4 1761 aa1.9□□□□□ -2.11
VPS8-215ENST00000460158 UNC13BO14795 1591 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 NCOA2Q15596 1464 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 ITSN1Q15811 1721 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 PCDH15Q96QU1 1955 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 PREX2Q70Z35 1606 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 TRBV7-1A0A0A6YYK4 115 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 H3BUT2 72 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 GNGT1P63211 74 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 NMSQ5H8A3 153 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 HEPN1Q6WQI6 88 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 CYP2G1PQ6ZSU1 146 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 LYPD1Q8N2G4 141 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 AMELYQ99218 206 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 CDC42SE1Q9NRR8 79 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 LHFPL6Q9Y693 200 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 SETBP1Q9Y6X0 1596 aa1.89□□□□□ -2.11
VPS8-215ENST00000460158 NRXN2Q9P2S2 1712 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 IQSEC2Q5JU85 1478 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 PI4KAP42356 2102 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 ABCA9Q8IUA7 1624 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 LOC285556D6RIA3 1793 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 BAZ2BQ9UIF8 2168 aaKnown RBP1.88□□□□□ -2.11
VPS8-215ENST00000460158 ABCC1P33527 1531 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 CUX1P39880 1505 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 TFF1P04155 84 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 SNRPFP62306 86 aaKnown RBP1.88□□□□□ -2.11
VPS8-215ENST00000460158 WFDC2Q14508 124 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 PMCHL1Q16048 86 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 PYDC2Q56P42 97 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 ZNF833PQ6ZTB9 187 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 TIMM21Q9BVV7 248 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 R4GN34 69 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 BLMP54132 1417 aaPredicted RBP1.88□□□□□ -2.11
VPS8-215ENST00000460158 SHROOM3Q8TF72 1996 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 TIAM1Q13009 1591 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 TARBP1Q13395 1621 aaKnown RBP1.88□□□□□ -2.11
VPS8-215ENST00000460158 MADDQ8WXG6 1647 aa1.88□□□□□ -2.11
VPS8-215ENST00000460158 COL1A2P08123 1366 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 EFCAB5A4FU69 1503 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 KCPQ6ZWJ8 1503 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 DUOX2Q9NRD8 1548 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 TRAV23DV6A0A075B6W5 121 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 TRAV12-3A0A0B4J271 114 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 A0A0G2JND7 137 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 TRBV10-1A0A0K0K1A3 114 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 MUC21A0A140T8X8 626 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 C2orf70A6NJV1 201 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 SIX6O95475 246 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 LY6EQ16553 131 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.87□□□□□ -2.11
VPS8-215ENST00000460158 NDUFA11Q86Y39 141 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 Q9BRP9 147 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 PRO1854Q9UHT4 67 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 PSORS1C2Q9UIG4 136 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 C22orf24Q9Y442 160 aa1.87□□□□□ -2.11
VPS8-215ENST00000460158 KIAA0100Q14667 2235 aaKnown RBP1.87□□□□□ -2.11
VPS8-215ENST00000460158 MDC1Q14676 2089 aaKnown RBP1.87□□□□□ -2.11
VPS8-215ENST00000460158 NRXN1Q9ULB1 1477 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms