RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
COPS7A-202ENST00000455113 RPS10P46783 165 aaKnown RBP12.29□□□□□ -0.44
COPS7A-202ENST00000455113 LINC00315P59091 139 aa12.29□□□□□ -0.44
COPS7A-202ENST00000455113 ESRGQ1W209 222 aa12.29□□□□□ -0.44
COPS7A-202ENST00000455113 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
COPS7A-202ENST00000455113 Q6ZR54 194 aa12.29□□□□□ -0.44
COPS7A-202ENST00000455113 EPPK1P58107 5090 aaKnown RBP12.29□□□□□ -0.44
COPS7A-202ENST00000455113 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 MT-ND6P03923 174 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 MGPP08493 103 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 C1orf134Q5TEV5 83 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 NBDYA0A0U1RRE5 68 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 CIDEAO60543 219 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 RAB4AP20338 218 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 FRZBQ92765 325 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 RNF185Q96GF1 192 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
COPS7A-202ENST00000455113 TRAPPC1Q9Y5R8 145 aa12.28□□□□□ -0.44
COPS7A-202ENST00000455113 RHODO00212 210 aa12.27□□□□□ -0.45
COPS7A-202ENST00000455113 SRIP30626 198 aa12.27□□□□□ -0.45
COPS7A-202ENST00000455113 ZFP2Q6ZN57 461 aa12.27□□□□□ -0.45
COPS7A-202ENST00000455113 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.45
COPS7A-202ENST00000455113 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
COPS7A-202ENST00000455113 MRPL18Q9H0U6 180 aaKnown RBP12.27□□□□□ -0.45
COPS7A-202ENST00000455113 F5H697 171 aa12.26□□□□□ -0.45
COPS7A-202ENST00000455113 APCSP02743 223 aa12.26□□□□□ -0.45
COPS7A-202ENST00000455113 ZNF56Q15929 161 aa12.26□□□□□ -0.45
COPS7A-202ENST00000455113 TTC32Q5I0X7 151 aa12.26□□□□□ -0.45
COPS7A-202ENST00000455113 PRSS29PA6NIE9 313 aa12.25□□□□□ -0.45
COPS7A-202ENST00000455113 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
COPS7A-202ENST00000455113 GYPEP15421 78 aa12.25□□□□□ -0.45
COPS7A-202ENST00000455113 FABP9Q0Z7S8 132 aa12.25□□□□□ -0.45
COPS7A-202ENST00000455113 TRAV26-2A0A0B4J265 109 aa12.24□□□□□ -0.45
COPS7A-202ENST00000455113 K7EQD1 137 aa12.24□□□□□ -0.45
COPS7A-202ENST00000455113 KIAA1644Q3SXP7 199 aa12.24□□□□□ -0.45
COPS7A-202ENST00000455113 Q6ZSN1 163 aa12.24□□□□□ -0.45
COPS7A-202ENST00000455113 RTL8CO15255 209 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 TRGC2P03986 189 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 C6orf223Q8N319 242 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 DNAH6Q9C0G6 4158 aa12.23□□□□□ -0.45
COPS7A-202ENST00000455113 D6R8Y8 96 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 NCR2O95944 276 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 CKS2P33552 79 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 LYPD5Q6UWN5 251 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
COPS7A-202ENST00000455113 SIVA1O15304 175 aa12.21□□□□□ -0.45
COPS7A-202ENST00000455113 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
COPS7A-202ENST00000455113 GATA1P15976 413 aaPredicted RBP12.21□□□□□ -0.45
COPS7A-202ENST00000455113 M0QY20 66 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 RHOHQ15669 191 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 FRAS1Q86XX4 4008 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 PHOX2AO14813 284 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 PPBPP02775 128 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 ORMDL3Q8N138 153 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
COPS7A-202ENST00000455113 H7C1H1 209 aa12.18□□□□□ -0.46
COPS7A-202ENST00000455113 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
COPS7A-202ENST00000455113 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
COPS7A-202ENST00000455113 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
COPS7A-202ENST00000455113 Q9UF83 564 aa12.17□□□□□ -0.46
COPS7A-202ENST00000455113 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
COPS7A-202ENST00000455113 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
COPS7A-202ENST00000455113 NRACQ8N912 160 aa12.17□□□□□ -0.46
COPS7A-202ENST00000455113 BIRC6Q9NR09 4857 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 LOC100131303A0A0U1RQF7 123 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 TNFRSF6BO95407 300 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 NPYP01303 97 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 OR10J3Q5JRS4 329 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 NIT2Q9NQR4 276 aa12.16□□□□□ -0.46
COPS7A-202ENST00000455113 TRBV10-1A0A0K0K1A3 114 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 PPP1R17O96001 155 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 LAMTOR2Q9Y2Q5 125 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 DNAH10Q8IVF4 4471 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 C1orf196B1AJZ1 125 aa12.14□□□□□ -0.47
COPS7A-202ENST00000455113 K7EP13 123 aa12.13□□□□□ -0.47
COPS7A-202ENST00000455113 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
COPS7A-202ENST00000455113 TRAV8-6A0A0B4J262 113 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 TRBV6-5A0A0K0K1A5 114 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 A0A1B0GVY2 172 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 DNAJC30Q96LL9 226 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 KRTAP1-5Q9BYS1 174 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 ST20Q9HBF5 79 aa12.12□□□□□ -0.47
COPS7A-202ENST00000455113 GAGE12JA6NER3 117 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 TIRAPP58753 221 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 SUMO2P61956 95 aaKnown RBP12.11□□□□□ -0.47
COPS7A-202ENST00000455113 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
COPS7A-202ENST00000455113 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms