RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 MAP1AP78559 2803 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 CCDC88CQ9P219 2028 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 IGHV3-64A0A075B6Q5 118 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 PNMA8CA0A1B0GUJ8 204 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 IFITM5A6NNB3 132 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 AKAIN1P0CW23 69 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 CCL4P13236 92 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 FABP4P15090 132 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 HIST1H1DP16402 221 aaKnown RBP2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 ASB16-AS1Q495Z4 193 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 IZUMO2Q6UXV1 221 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 C8orf59Q8N0T1 100 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 ACBD7Q8N6N7 88 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 CCL4L1Q8NHW4 92 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 COPS9Q8WXC6 57 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 DEDD2Q8WXF8 326 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 SDF2Q99470 211 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 CST9LQ9H4G1 147 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 TAS2R4Q9NYW5 299 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZFP30Q9Y2G7 519 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 RP1P56715 2156 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 CACNA1CQ13936 2221 aa2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 EPPK1P58107 5090 aaKnown RBP2.14□□□□□ -2.07
HMGB1P15-201ENST00000453854 MEGF8Q7Z7M0 2845 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 IGHV1-18A0A0C4DH31 117 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 A0A0G2JMM0 328 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 FAM236AA0A1B0GUQ0 79 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 FAM236BA0A1B0GV22 79 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 LOC107986453A0A1B0GWG9 222 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 A0A1W2PPB8 328 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 OR51F1A6NGY5 319 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 KIR3DP1A8MWS1 328 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 C17orf112F2Z3M2 114 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 RPL36A-HNRNPH2H7BZ11 118 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 OR1I1O60431 355 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 IFNA17P01571 189 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 GNG2P59768 71 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 TMEM258P61165 79 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 CDK5R1Q15078 307 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 KRTAP25-1Q3LHN0 102 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 SPANXN5Q5MJ07 72 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 LINC01545Q5VT33 79 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 AAED1Q7RTV5 226 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 C10orf111Q8N326 155 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 SLC35B3Q9H1N7 401 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 C14orf132Q9NPU4 83 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 SAR1AQ9NR31 198 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 SCN3BQ9NY72 215 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 COMMD3Q9UBI1 195 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 METTL1Q9UBP6 276 aaKnown RBP2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 PSORS1C2Q9UIG4 136 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 BOKQ9UMX3 212 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 CCL26Q9Y258 94 aa2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 CHD3Q12873 2000 aaKnown RBP2.13□□□□□ -2.07
HMGB1P15-201ENST00000453854 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 PVALEFA0A1B0GWK0 134 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 RBP4P02753 201 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 PYYP10082 97 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZNF93P35789 620 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 SNRPD3P62318 126 aaKnown RBP2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZNF90Q03938 601 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 ESRGQ1W209 222 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 TEX261Q6UWH6 196 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 TMEM136Q6ZRR5 245 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZNF826PQ6ZT77 177 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 LINC00471Q8N535 108 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 LINC00311Q8N616 119 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 WFDC11Q8NEX6 87 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 CHCHD1Q96BP2 118 aaKnown RBP2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 RETNLBQ9BQ08 111 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 LY96Q9Y6Y9 160 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 HSPE1-MOB4S4R3N1 261 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 NBEAL2Q6ZNJ1 2754 aa2.12□□□□□ -2.07
HMGB1P15-201ENST00000453854 SVEP1Q4LDE5 3571 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 TANC2Q9HCD6 1990 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 TNFP01375 233 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 BAALC-AS2P0C853 105 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 CRYGAP11844 174 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 NNATQ16517 81 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 CCSMST1Q4G0I0 132 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 MEIG1Q5JSS6 88 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 Q6ZQT0 140 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 HMGN2P46Q86SG4 172 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 PKMYT1Q99640 499 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 NIT2Q9NQR4 276 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 PRO0461Q9UI25 63 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 TPRKBQ9Y3C4 175 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 DNAJC15Q9Y5T4 150 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 MINOS1-NBL1R4GNA1 71 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZGRF1Q86YA3 2104 aa2.11□□□□□ -2.07
HMGB1P15-201ENST00000453854 ANK3Q12955 4377 aaKnown RBP2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 ARHGAP32A7KAX9 2087 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 MGAM2Q2M2H8 2515 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 TRAV12-2A0A075B6T6 113 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 A0A0J9YX75 114 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 LOC100130705A0A1B0GUX0 176 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 TMEM218A2RU14 115 aa2.1□□□□□ -2.07
HMGB1P15-201ENST00000453854 ZNF737O75373 536 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms