RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	KLHL30-AS1	Q8NEE0	82 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	UBR5	O95071	2799 aa	Predicted RBP	12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	DEFB136	Q30KP8	78 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	ZNRF2	Q8NHG8	242 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058	CLUHP3	Q96NS8	147 aa		12.45	□□□□□ -0.42
TOM1-210	ENST00000449058		G3V4G9	280 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058	SORL1	Q92673	2214 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058	TRAV2	A0A0B4J234	112 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058	DEFB131A	P59861	70 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058	SCGB1D4	Q6XE38	83 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058	EDA2R	Q9HAV5	297 aa		12.44	□□□□□ -0.42
TOM1-210	ENST00000449058		H3BMM0	161 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058		I3L3M4	83 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058	DEFB113	Q30KQ7	82 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058	NFE4	Q86UQ8	179 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058	C20orf203	Q8NBC4	194 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058	ZNF462	Q96JM2	2506 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058		Q5PR19	223 aa		12.43	□□□□□ -0.42
TOM1-210	ENST00000449058	RBMY1B	A6NDE4	496 aa	Known RBP	12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	RBMY1E	A6NEQ0	496 aa	Known RBP	12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	RBMY1D	P0C7P1	496 aa	Known RBP	12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	LRRC75A-AS1	Q8N1F1	130 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	ZNF843	Q8N446	348 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	FAM208B	Q5VWN6	2430 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058		A0A0J9YY99	117 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	TSPEAR-AS2	P59090	65 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	TMEM170B	Q5T4T1	132 aa		12.42	□□□□□ -0.42
TOM1-210	ENST00000449058	UBE2D1	P51668	147 aa		12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	SPAG8	Q99932	426 aa	Predicted RBP	12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	OPRPN	Q99935	248 aa	Predicted RBP	12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	TMEM61	Q8N0U2	210 aa		12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	C4orf3	Q8WVX3	66 aa		12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	PEMT	Q9UBM1	199 aa		12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	EPG5	Q9HCE0	2579 aa		12.41	□□□□□ -0.42
TOM1-210	ENST00000449058	LRRK2	Q5S007	2527 aa		12.4	□□□□□ -0.42
TOM1-210	ENST00000449058	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
TOM1-210	ENST00000449058	AMELX	Q99217	191 aa		12.4	□□□□□ -0.42
TOM1-210	ENST00000449058	CENPE	Q02224	2701 aa		12.4	□□□□□ -0.42
TOM1-210	ENST00000449058		F8W1H4	67 aa		12.39	□□□□□ -0.43
TOM1-210	ENST00000449058	SPANXB1	Q9NS25	103 aa	Predicted RBP	12.39	□□□□□ -0.43
TOM1-210	ENST00000449058	PIK3CD-AS1	Q5SR53	167 aa		12.38	□□□□□ -0.43
TOM1-210	ENST00000449058		Q96MF0	132 aa		12.38	□□□□□ -0.43
TOM1-210	ENST00000449058	PTPN13	Q12923	2485 aa		12.38	□□□□□ -0.43
TOM1-210	ENST00000449058	TEX15	Q9BXT5	2789 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	IGLV4-3	A0A075B6K6	122 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	TMEM223	A0PJW6	202 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058		H3BMG7	143 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058		J3QQQ9	107 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	HTN1	P15515	57 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	SLC25A29	Q8N8R3	303 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	PTH2	Q96A98	100 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	DUX3	Q96PT4	197 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	NACA	E9PAV3	2078 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058		M0R2P5	195 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	DLX4	Q92988	240 aa	Predicted RBP	12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	MAP6D1	Q9H9H5	199 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058	PGPEP1	Q9NXJ5	209 aa		12.37	□□□□□ -0.43
TOM1-210	ENST00000449058		A8MWV9	139 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	PROK1	P58294	105 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	KRTAP1-3	Q8IUG1	177 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	IGHV3-73	A0A0B4J1V6	119 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	TEX48	A0A1B0GUV7	120 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	PYGO1	Q9Y3Y4	419 aa		12.36	□□□□□ -0.43
TOM1-210	ENST00000449058	LEPROT	O15243	131 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	IGHV3-30	P01768	117 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	PRM2	P04554	102 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	IGHV3-30-5	P0DP03	117 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	ZNF22	P17026	224 aa	Predicted RBP	12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	RPL24	P83731	157 aa	Known RBP	12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	ZNF415	Q09FC8	603 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	WFDC2	Q14508	124 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	LINC00467	Q9BRT7	94 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	LGALS3	P17931	250 aa	Known RBP	12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	DEFB114	Q30KQ6	69 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	FAM104A	Q969W3	186 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	VCX2	Q9H322	139 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	MRPL16	Q9NX20	251 aa	Known RBP	12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	PRO0461	Q9UI25	63 aa		12.35	□□□□□ -0.43
TOM1-210	ENST00000449058	RHOD	O00212	210 aa		12.34	□□□□□ -0.43
TOM1-210	ENST00000449058	CREBBP	Q92793	2442 aa		12.34	□□□□□ -0.43
TOM1-210	ENST00000449058	NAV2	Q8IVL1	2488 aa		12.34	□□□□□ -0.43
TOM1-210	ENST00000449058	KHDC1L	Q5JSQ8	128 aa		12.34	□□□□□ -0.43
TOM1-210	ENST00000449058	DYNLRB2	Q8TF09	96 aa		12.34	□□□□□ -0.43
TOM1-210	ENST00000449058		A0A0J9YXV3	536 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	TSPAN13	O95857	204 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	NDUFA11	Q86Y39	141 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	TMEM86B	Q8N661	226 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	C11orf72	Q8NBR9	251 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	GAGE13	Q4V321	117 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058		Q6ZSN1	163 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	TNFRSF18	Q9Y5U5	241 aa		12.33	□□□□□ -0.44
TOM1-210	ENST00000449058	ABCA12	Q86UK0	2595 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058	CD28	P10747	220 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058	CRYBA4	P53673	196 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058	CFAP126	Q5VTH2	177 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058	RAX2	Q96IS3	184 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058		Q9UF83	564 aa		12.32	□□□□□ -0.44
TOM1-210	ENST00000449058	APOM	O95445	188 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	BEAN1	Q3B7T3	259 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058		Q6ZSV7	163 aa		12.3	□□□□□ -0.44

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