RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 UNQ9165/PRO28630Q6UXU0 137 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 BDP1A6H8Y1 2624 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 H3BT86 120 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
CNOT3-204ENST00000447684 ADAMTSL4-AS1Q5T5F5 129 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 IGF2-ASQ6U949 168 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 TIMM21Q9BVV7 248 aa11.96□□□□□ -0.49
CNOT3-204ENST00000447684 OOSP1A8MZH6 123 aa11.96□□□□□ -0.5
CNOT3-204ENST00000447684 TRAV12-3A0A0B4J271 114 aa11.95□□□□□ -0.5
CNOT3-204ENST00000447684 A8MZ25 164 aa11.95□□□□□ -0.5
CNOT3-204ENST00000447684 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 LOC107984640A0A0U1RRK4 108 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 MED14OSP0DP75 135 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
CNOT3-204ENST00000447684 DAND5Q8N907 189 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 DUX5Q96PT3 197 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 U3KQE9 123 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 PTPRZ1P23471 2315 aaPredicted RBP11.94□□□□□ -0.5
CNOT3-204ENST00000447684 I3L3M4 83 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 KLK9Q9UKQ9 250 aa11.94□□□□□ -0.5
CNOT3-204ENST00000447684 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
CNOT3-204ENST00000447684 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
CNOT3-204ENST00000447684 KLK5Q9Y337 293 aaPredicted RBP11.93□□□□□ -0.5
CNOT3-204ENST00000447684 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
CNOT3-204ENST00000447684 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
CNOT3-204ENST00000447684 COL6A6A6NMZ7 2263 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 TRBV7-7A0A0K0K1E9 115 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 LST1O00453 97 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 IGLV4-3A0A075B6K6 122 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 IGHV3-11P01762 117 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 CD28P10747 220 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 BSNQ9UPA5 3926 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 ZFHX3Q15911 3703 aa11.91□□□□□ -0.5
CNOT3-204ENST00000447684 LITAFQ99732 161 aa11.9□□□□□ -0.5
CNOT3-204ENST00000447684 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
CNOT3-204ENST00000447684 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
CNOT3-204ENST00000447684 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
CNOT3-204ENST00000447684 NXPH4O95158 308 aa11.9□□□□□ -0.51
CNOT3-204ENST00000447684 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
CNOT3-204ENST00000447684 A0A0J9YX75 114 aa11.89□□□□□ -0.51
CNOT3-204ENST00000447684 A0A0U1RRA0 63 aa11.89□□□□□ -0.51
CNOT3-204ENST00000447684 GRNP28799 593 aaKnown RBP11.89□□□□□ -0.51
CNOT3-204ENST00000447684 LINC01600Q96MT4 127 aa11.89□□□□□ -0.51
CNOT3-204ENST00000447684 TRAV12-2A0A075B6T6 113 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 M0QY20 66 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 NDUFA7O95182 113 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 ZFP36P26651 326 aaKnown RBP11.88□□□□□ -0.51
CNOT3-204ENST00000447684 ATP5J2P56134 94 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 NSUN5P1Q3KNT7 163 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 HERVK_113P63121 156 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 RHOHQ15669 191 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 C3orf22Q8N5N4 141 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 SORL1Q92673 2214 aa11.88□□□□□ -0.51
CNOT3-204ENST00000447684 SOCS3O14543 225 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 MIAQ16674 131 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
CNOT3-204ENST00000447684 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
CNOT3-204ENST00000447684 IGHV3-73A0A0B4J1V6 119 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 NPFFO15130 113 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
CNOT3-204ENST00000447684 SPTAN1Q13813 2472 aaKnown RBP11.87□□□□□ -0.51
CNOT3-204ENST00000447684 TRAV41A0A0B4J266 112 aa11.86□□□□□ -0.51
CNOT3-204ENST00000447684 SAA4P35542 130 aa11.86□□□□□ -0.51
CNOT3-204ENST00000447684 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
CNOT3-204ENST00000447684 NRGNQ92686 78 aa11.86□□□□□ -0.51
CNOT3-204ENST00000447684 FAM19A4Q96LR4 140 aa11.86□□□□□ -0.51
CNOT3-204ENST00000447684 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
CNOT3-204ENST00000447684 RIF1Q5UIP0 2472 aaKnown RBP11.85□□□□□ -0.51
CNOT3-204ENST00000447684 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 Q8NA96 180 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 IGHV3OR16-10A0A075B7F0 116 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 SPANXDQ9BXN6 97 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 SPANXCQ9NY87 97 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 HTN1P15515 57 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-204ENST00000447684 EDA2RQ9HAV5 297 aa11.84□□□□□ -0.51
CNOT3-204ENST00000447684 CREBBPQ92793 2442 aa11.83□□□□□ -0.51
CNOT3-204ENST00000447684 CELSR1Q9NYQ6 3014 aa11.83□□□□□ -0.52
CNOT3-204ENST00000447684 OTOGLQ3ZCN5 2332 aa11.83□□□□□ -0.52
CNOT3-204ENST00000447684 UQCRQO14949 82 aa11.83□□□□□ -0.52
CNOT3-204ENST00000447684 RS1O15537 224 aa11.83□□□□□ -0.52
CNOT3-204ENST00000447684 APRG1Q8IVJ8 170 aa11.83□□□□□ -0.52
CNOT3-204ENST00000447684 KLLNB2CW77 178 aa11.82□□□□□ -0.52
CNOT3-204ENST00000447684 EDN2P20800 178 aa11.82□□□□□ -0.52
CNOT3-204ENST00000447684 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
CNOT3-204ENST00000447684 LINC00643Q86TS7 51 aa11.81□□□□□ -0.52
CNOT3-204ENST00000447684 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
CNOT3-204ENST00000447684 IMUPQ9GZP8 106 aa11.81□□□□□ -0.52
CNOT3-204ENST00000447684 ACYP1P07311 99 aa11.81□□□□□ -0.52
CNOT3-204ENST00000447684 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
CNOT3-204ENST00000447684 DAZ4Q86SG3 579 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms